Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g01406 | ATGGGAAATAGGCTCCATCTTTCAGTGCTTCTGGTTTTGGTAACAGTTTTACTTTCAACCTTTCATTCAGAGCAACTGCAATCCTCTCACTCTCAGACCCTTCTAAGAATTCAAAAGCTGTTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTTACTGTTGTATGCTATGAGGGCACCATAACCCAGCTACACATAGTTGGTGAAACAAGAGCTCTTCTTCTCCCTAGAAATTTCTCAATAGATTCCTTTGTCAAAACACTGGTTAGGCTTCCCAGTTTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTGCTGGTTTGTCATCACTGGAAATAGTCAATGTGAGTTCAAATTTTCTATATGGTTCCATCCCTCCAGAGTTCTCATTACTGTCACACCTCCAAACACTCATTCTAGATGACAACATGTTTTCTGGCCACCTTCCTGAATGGCTTGATTCCTTTCCAACCTTAACAGTGTTAAGTTTGAAAAACAACTTGTTCAATGGTTCACTTCCGGATTCGCTTAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCACATAACCATCTTTATGGACCAGTGCCTGATTTGCGCCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCGGTTTCCGCAGCTTGGTGACAAATTGGTCACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGTATCTCTGATGAAGTGAGCTCATATTATCAACTTGAGAGATTTGACATCTCAGCAAACACATTTGTTGGGCCATTCCAACTAGCACTGTTATCACTTCCTTCTATTACTTATCTGAACATTTCTGGGAACAAATTAACAGGAATGCTTTTTGACAATCTGTCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCAAAATGTTTAATGCCAAATTCCAATGACAGGACTGTCTTGTATGCTAGAAATTGCCTAGAGGATACAAATCAAAATCAGCATGCACTGCCCTTTTGCCACACTGAAGCCATAGCTGTGGGAATAGTACCTGAGGGAAAGAAGCACAAACCAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTGTTGCACTGCTTTTCTTTATTATTAGAAGAGGAAATGTCGAAAGCAAAGTCAAGAGTCCTCCAACAAAATTAATATCAGAGAATGCAGCTTCTGGATACACTTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAATTCGGAACAGTTGGCTTGCCACCTTATCGAGCCTTTTCACTGGAAGAGATTGTAGCAGCTACAAACAACTTTGACACGGCTACTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATGACCAAAAGCTACAGCACTCAAGAATTTATGCATAACATAGAGCTGATATCAAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACACAGCTTTGAATGTTATCTGGATGATTCAAGTGTCAGCAGCATATTTATCGTCTTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATGGGCACTATAGAAAATCCCTGACATGGATGCAGCGCATAGAAGCTGCAATTGGAGTAGCAAAGGGCATCCATTTTTTGCATACAGGGATTGGCCCTGGTGTATATTCAAAAAATCTCAAAATAACAGATGTTTTACTTGACCAAAATTTTGCTGCAAAAATCAGCAATTATGACTTGCCTTTGTTATCTAACATGAGAAAGGTTGGGCAAGGTAATCCTTCCAGCGGATGCAGAAGTCCTAGCATTAACAAAAGTGTAAAACATGAAGACAAGTCTGATGTATATGATTTTGGAGTAATACTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCGAGCATAACAGCTGATGGTGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGCGTGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTAGTCAAAGAGCCAGCAGAGAGGCCCTCTATAGAGGATGTTCTGTGGAATTTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGAGAGGAGACTCTCAAAGTAGTAGTGACAGCTCTCCCATCTCTCCTTTAGCATCTCGACGAATGACCTTCCATTAG | 2352 | 0.4094 | MGNRLHLSVLLVLVTVLLSTFHSEQLQSSHSQTLLRIQKLLNFPAVLSSWNNNTDFCSTDSTSSLTVVCYEGTITQLHIVGETRALLLPRNFSIDSFVKTLVRLPSLKVLTLVSLGIWGPLPGKIAGLSSLEIVNVSSNFLYGSIPPEFSLLSHLQTLILDDNMFSGHLPEWLDSFPTLTVLSLKNNLFNGSLPDSLSSLENMRILSLSHNHLYGPVPDLRRLTNLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSISDEVSSYYQLERFDISANTFVGPFQLALLSLPSITYLNISGNKLTGMLFDNLSCNPGLEAVDLSSNLLTGSLPKCLMPNSNDRTVLYARNCLEDTNQNQHALPFCHTEAIAVGIVPEGKKHKPVSKAVLSLGIVCGTFGGVAIVALLFFIIRRGNVESKVKSPPTKLISENAASGYTSKLLSDARYISQTMKFGTVGLPPYRAFSLEEIVAATNNFDTATFMGEGSQGKMHRGQLKDGLLVAIRSVKMTKSYSTQEFMHNIELISKYRHRHLVSVLGHSFECYLDDSSVSSIFIVFEYVPNGTLKSWISDGHYRKSLTWMQRIEAAIGVAKGIHFLHTGIGPGVYSKNLKITDVLLDQNFAAKISNYDLPLLSNMRKVGQGNPSSGCRSPSINKSVKHEDKSDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPAVRKACLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSSDSSPISPLASRRMTFH | 783 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g01406 | 783 | MobiDBLite | consensus disorder prediction | 760 | 783 | - | - | |
Pumo1g01406 | 783 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 27 | 245 | - | - | |
Pumo1g01406 | 783 | Gene3D | Ribonuclease Inhibitor | 27 | 241 | IPR032675 | - | |
Pumo1g01406 | 783 | ProSiteProfiles | Protein kinase domain profile. | 477 | 751 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo1g01406 | 783 | SUPERFAMILY | L domain-like | 101 | 353 | - | - | |
Pumo1g01406 | 783 | Gene3D | Ribonuclease Inhibitor | 242 | 355 | IPR032675 | - | |
Pumo1g01406 | 783 | Gene3D | Phosphorylase Kinase; domain 1 | 441 | 559 | - | - | |
Pumo1g01406 | 783 | Pfam | Protein tyrosine and serine/threonine kinase | 482 | 746 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo1g01406 | 783 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 450 | 559 | - | - | |
Pumo1g01406 | 783 | PANTHER | UNNAMED PRODUCT | 85 | 679 | - | - | |
Pumo1g01406 | 783 | MobiDBLite | consensus disorder prediction | 760 | 776 | - | - | |
Pumo1g01406 | 783 | Pfam | Leucine rich repeat | 153 | 213 | IPR001611 | GO:0005515 | |
Pumo1g01406 | 783 | Gene3D | Transferase(Phosphotransferase) domain 1 | 560 | 769 | - | - | |
Pumo1g01406 | 783 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 560 | 765 | - | - | |
Pumo1g01406 | 783 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 751 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g01406 | Pumo-Chr1 | 23120776 | 23125874 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g01406 | 43 | 777 | Miscellaneous Gene Families | AT3G03770 | 62.923 | 0.0 | 894 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Pumo1g01406 | PK_Tyr_Ser-Thr | 5.1e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g01406 | - | - | gmx:100813207 | 1388.24 |