Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01406 ATGGGAAATAGGCTCCATCTTTCAGTGCTTCTGGTTTTGGTAACAGTTTTACTTTCAACCTTTCATTCAGAGCAACTGCAATCCTCTCACTCTCAGACCCTTCTAAGAATTCAAAAGCTGTTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTTACTGTTGTATGCTATGAGGGCACCATAACCCAGCTACACATAGTTGGTGAAACAAGAGCTCTTCTTCTCCCTAGAAATTTCTCAATAGATTCCTTTGTCAAAACACTGGTTAGGCTTCCCAGTTTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTGCTGGTTTGTCATCACTGGAAATAGTCAATGTGAGTTCAAATTTTCTATATGGTTCCATCCCTCCAGAGTTCTCATTACTGTCACACCTCCAAACACTCATTCTAGATGACAACATGTTTTCTGGCCACCTTCCTGAATGGCTTGATTCCTTTCCAACCTTAACAGTGTTAAGTTTGAAAAACAACTTGTTCAATGGTTCACTTCCGGATTCGCTTAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCACATAACCATCTTTATGGACCAGTGCCTGATTTGCGCCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCGGTTTCCGCAGCTTGGTGACAAATTGGTCACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGTATCTCTGATGAAGTGAGCTCATATTATCAACTTGAGAGATTTGACATCTCAGCAAACACATTTGTTGGGCCATTCCAACTAGCACTGTTATCACTTCCTTCTATTACTTATCTGAACATTTCTGGGAACAAATTAACAGGAATGCTTTTTGACAATCTGTCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCAAAATGTTTAATGCCAAATTCCAATGACAGGACTGTCTTGTATGCTAGAAATTGCCTAGAGGATACAAATCAAAATCAGCATGCACTGCCCTTTTGCCACACTGAAGCCATAGCTGTGGGAATAGTACCTGAGGGAAAGAAGCACAAACCAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTGTTGCACTGCTTTTCTTTATTATTAGAAGAGGAAATGTCGAAAGCAAAGTCAAGAGTCCTCCAACAAAATTAATATCAGAGAATGCAGCTTCTGGATACACTTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAATTCGGAACAGTTGGCTTGCCACCTTATCGAGCCTTTTCACTGGAAGAGATTGTAGCAGCTACAAACAACTTTGACACGGCTACTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATGACCAAAAGCTACAGCACTCAAGAATTTATGCATAACATAGAGCTGATATCAAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACACAGCTTTGAATGTTATCTGGATGATTCAAGTGTCAGCAGCATATTTATCGTCTTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATGGGCACTATAGAAAATCCCTGACATGGATGCAGCGCATAGAAGCTGCAATTGGAGTAGCAAAGGGCATCCATTTTTTGCATACAGGGATTGGCCCTGGTGTATATTCAAAAAATCTCAAAATAACAGATGTTTTACTTGACCAAAATTTTGCTGCAAAAATCAGCAATTATGACTTGCCTTTGTTATCTAACATGAGAAAGGTTGGGCAAGGTAATCCTTCCAGCGGATGCAGAAGTCCTAGCATTAACAAAAGTGTAAAACATGAAGACAAGTCTGATGTATATGATTTTGGAGTAATACTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCGAGCATAACAGCTGATGGTGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGCGTGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTAGTCAAAGAGCCAGCAGAGAGGCCCTCTATAGAGGATGTTCTGTGGAATTTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGAGAGGAGACTCTCAAAGTAGTAGTGACAGCTCTCCCATCTCTCCTTTAGCATCTCGACGAATGACCTTCCATTAG 2352 0.4094 MGNRLHLSVLLVLVTVLLSTFHSEQLQSSHSQTLLRIQKLLNFPAVLSSWNNNTDFCSTDSTSSLTVVCYEGTITQLHIVGETRALLLPRNFSIDSFVKTLVRLPSLKVLTLVSLGIWGPLPGKIAGLSSLEIVNVSSNFLYGSIPPEFSLLSHLQTLILDDNMFSGHLPEWLDSFPTLTVLSLKNNLFNGSLPDSLSSLENMRILSLSHNHLYGPVPDLRRLTNLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSISDEVSSYYQLERFDISANTFVGPFQLALLSLPSITYLNISGNKLTGMLFDNLSCNPGLEAVDLSSNLLTGSLPKCLMPNSNDRTVLYARNCLEDTNQNQHALPFCHTEAIAVGIVPEGKKHKPVSKAVLSLGIVCGTFGGVAIVALLFFIIRRGNVESKVKSPPTKLISENAASGYTSKLLSDARYISQTMKFGTVGLPPYRAFSLEEIVAATNNFDTATFMGEGSQGKMHRGQLKDGLLVAIRSVKMTKSYSTQEFMHNIELISKYRHRHLVSVLGHSFECYLDDSSVSSIFIVFEYVPNGTLKSWISDGHYRKSLTWMQRIEAAIGVAKGIHFLHTGIGPGVYSKNLKITDVLLDQNFAAKISNYDLPLLSNMRKVGQGNPSSGCRSPSINKSVKHEDKSDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPAVRKACLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSSDSSPISPLASRRMTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01406 783 MobiDBLite consensus disorder prediction 760 783 - -
Pumo1g01406 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Pumo1g01406 783 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Pumo1g01406 783 ProSiteProfiles Protein kinase domain profile. 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01406 783 SUPERFAMILY L domain-like 101 353 - -
Pumo1g01406 783 Gene3D Ribonuclease Inhibitor 242 355 IPR032675 -
Pumo1g01406 783 Gene3D Phosphorylase Kinase; domain 1 441 559 - -
Pumo1g01406 783 Pfam Protein tyrosine and serine/threonine kinase 482 746 IPR001245 GO:0004672|GO:0006468
Pumo1g01406 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Pumo1g01406 783 PANTHER UNNAMED PRODUCT 85 679 - -
Pumo1g01406 783 MobiDBLite consensus disorder prediction 760 776 - -
Pumo1g01406 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pumo1g01406 783 Gene3D Transferase(Phosphotransferase) domain 1 560 769 - -
Pumo1g01406 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 765 - -
Pumo1g01406 783 SUPERFAMILY Protein kinase-like (PK-like) 457 751 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01406 Pumo-Chr1 23120776 23125874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01406 43 777 Miscellaneous Gene Families AT3G03770 62.923 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo1g01406 PK_Tyr_Ser-Thr 5.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01406 - - gmx:100813207 1388.24