Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01386 ATGGCACCCTCGCTCGATCAAAGTGCAAACACAGTTTGCGTGATGGATGCTTCGGGCCAGTTAGGTACTAGTCTGGTCCAGCGACTACTTCAACGGGGATACAACGTCCATGCCTCTGTTCAATCACATGGGAATGAACAACTCAATGGGATTTCTGCTGAGTCCAATAGGCTCAAGATTTTCCGTTCAGACCCTTTTGATTACCATAGCATAACCGATGCTCTCAGAGGCTGCTCTGGCTTGTTCTATGTGTTTGAACCACCTCAGGACCAACCCAACTATGATGAATACATAGCAGACGTAGAGGTGAGAGCAGCACACAATGTGGTTGAAGCTTGCGCTCAAACAGAAACCATAGACAAAGTGGTTTTCACTTCATCTGCAACAGCTGTCGTTTGGAGGGAGGATCGCAAATCCATGGAATCGGACTTGGATGAGAAACATTGGAGTGATGTCAATCTCTGTCGTAAGTTCAAGTTATGGCACGGGATGTCAAAGACAATGGCGGAGAGGACTGCGTGGGCCCTGGCAATGGACAGAGGGGTGAGCATGGTGTCCATAAACGCAGGCTTATTGATGGGCGGTGAAGATCATGTGTGCATCAAAAATCCCTACCTCAGAGGAGCTGCGGAGATGTACGAGGATGGTGTGTTGGTGACCGTAGATTTAGGAATCTTGGTCGATACCCACATCGGTGTCTACGAAGATGTCTCCTCCTACGGTCGCTACTTGTGCTTCAACCACGTCATCAACAACCACTACGACGCCGTTCAGCTCGCCCTCAAGGTCAAGGCAATGCCTACCCCTCCACCTTCCTTACCTCTAAGCTGTGACGCAGGGAAAGAGTTTATCCAACAAAGAATAAGCAACAAGAAATTGAACGAACTGATGGTCAATTTTGTGACTTGA 909 0.4851 MAPSLDQSANTVCVMDASGQLGTSLVQRLLQRGYNVHASVQSHGNEQLNGISAESNRLKIFRSDPFDYHSITDALRGCSGLFYVFEPPQDQPNYDEYIADVEVRAAHNVVEACAQTETIDKVVFTSSATAVVWREDRKSMESDLDEKHWSDVNLCRKFKLWHGMSKTMAERTAWALAMDRGVSMVSINAGLLMGGEDHVCIKNPYLRGAAEMYEDGVLVTVDLGILVDTHIGVYEDVSSYGRYLCFNHVINNHYDAVQLALKVKAMPTPPPSLPLSCDAGKEFIQQRISNKKLNELMVNFVT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01386 302 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 302 - -
Pumo1g01386 302 CDD FR_SDR_e 12 298 - -
Pumo1g01386 302 Gene3D - 4 302 - -
Pumo1g01386 302 Pfam NAD(P)H-binding 17 131 IPR016040 -
Pumo1g01386 302 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 293 - -
Pumo1g01386 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 275 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01386 Pumo-Chr1 22850712 22855590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01386 5 302 Monolignol Biosynthesis Gene Families AT5G58490 31.579 2.97e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01386 - - gmx:100783579 515.383