Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01378 ATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCGTGGTTGAAGCCTCTTCTCAAAGAAAGCTTCTTTGTTCAATGCAAGCTGCATGCTGATTCTCACAAAAGCGAGTGCAATATGTACTGTTTGGATTGTATGAACGGTGCTCTCTGCTCTCTCTGCCTCGCTTACCACAAAGATCACCGTGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATCATCAACAGCGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGGAAAGGTGTCACCAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTTGATTCCTTCAGATTCTGTTCTCTTGGTTGTAAGATTGTTGGGACTTCAAGGAACTTCCAGAAGAAGAAAAAGTCAACAGCAATGGCATCAGACTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGGAAGAAGAACAGCAACAAGGTGCAGAGCTTCACACCGTCCACACCGCCACCAACTTCTGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATTCCACACCGTGCCCCAATGGGAGGACTTTTCATAGAATACTAG 648 0.4738 MGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRNFQKKKKSTAMASDSEDSYSSNSSHGKKNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLFIEY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01378 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 208 - -
Pumo1g01378 215 MobiDBLite consensus disorder prediction 149 209 - -
Pumo1g01378 215 MobiDBLite consensus disorder prediction 158 192 - -
Pumo1g01378 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01378 Pumo-Chr1 22764315 22766927 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo1g01378 PLATZ 3.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01378 - - vra:106774881 413.305