Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01372 ATGGGGGATGTGGCTAAGGACCTTGCAGCTGGGACTGTTGGAGGTGCAGCACAGTTGATATGTGGACACCCCTTTGACACTATCAAAGTCAAGCTCCAAAGCCAGCCTGCACCACTCCCTGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAATAGCAGCTGAAGGACCAAGGGGTTTATACAAAGGTATGGGTGCCCCACTTGCTACAGTAGCAGCCTTCAATGCTGTCCTGTTTACAGTGAGGGGACAAATGGAAACATTAGTGAGGTCCCATCCTGGTGCCCCCCTCACAGTGGATCAGCAGGTTGTTTGTGGAGCTGGAGCCGGAGTTGCTGTTTCCATTCTTGCTTGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGCTGGCTCTGGAGAAGCTACCGTGGCTGTTAAGTATGGAGGACCCATGGATGTGGCGAGGCATGTTCTCAGGTCAGAAGGGGGCATGAGAGGCCTTTTCAAGGGCTTGGTTCCCACTATGGGGCGTGAGATACCCGGAAATGCTATAATGTTTGGTGTATATGAAGCATTAAAGCAAAAGTTTGCAGGAGGCACTGATACTTCTGGCCTAAGTAGAGGCTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCCTTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAATCCAAAATTTTCTGGTTCATTTGATGCATTCAGAAAGATTCGAGCTTCAGAAGGGTTCAAAGGCTTGTATAAGGGTTTTGGCCCTGCAATGGCCCGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGATGA 894 0.4866 MGDVAKDLAAGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQLPKYSGAFDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETLVRSHPGAPLTVDQQVVCGAGAGVAVSILACPTELIKCRLQAQSALAGSGEATVAVKYGGPMDVARHVLRSEGGMRGLFKGLVPTMGREIPGNAIMFGVYEALKQKFAGGTDTSGLSRGSLIVAGGLAGASFWFLVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01372 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Pumo1g01372 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Pumo1g01372 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Pumo1g01372 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Pumo1g01372 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Pumo1g01372 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Pumo1g01372 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Pumo1g01372 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Pumo1g01372 297 Pfam Mitochondrial carrier protein 104 200 IPR018108 -
Pumo1g01372 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01372 Pumo-Chr1 22586413 22590098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01372 22 296 Antiporters AT1G79900 33.096 4.59e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01372 K15109 - gmx:100791908 565.074