Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g01350 | ATGGCTTTCTTCACCTCTGCTTCAAACTCTAATCAAACCCAAAAACAGACCTTGTTGTTCACATTTATCATCTTCACGTTGTTCCATACACTCTTTACCACTGTAGTGTCCATTTCATTCAACTTTTCAACCTTCCAACAAAACTTGAATAATCTAATAGACTTTAAGGGTGATGCCTTTTCCTCAAACGTTACAAATGTCACTTGGAAGAGCAGCATTAAGAATGGGTCGGTTGCTAATGCTTGGATATGGTACAACTCTACAACCAAAAATCTCTCTGTGTTCCTTACTTATGCTAATAATCCAACCTTTAATGGCAATTCTAGTCTTTGGTATGTCATTGATTTGAGGGATGTGTTGCCAGAGTTTGTTAGAATAGGCTTTTCTGCTGCCACAGGTTCGTGGATTGAAATACACAACATTTTGTCTTGGTCATTCAGTTCAAACTTAGAAGAGGGTGGTAGGAAGAAGGTTAAGGTTGGTTTAGTAGTTGGTTTAAGTGTTGGTTTAGGTTGTTTAGTTTGTGTTGTATGTCTATTATGGTTTACCTTTTGGAGAAGGAGAAATAGAGGAAGGGAGGACAACATAGGTCTTGATGCTTCTATGGATGATGAGTTTGAGAGAGGAACTGGTCCTAAGAGGTTCACCTACCGGGAACTAAGCAACGCAACCAACAACTTTGCTGAAGAAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGTTTAATTGTAAACTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCAAAAGGGTCAAAACAAGGGAAAAAGGAATACGTATCAGAAGTGAGAGTAATCAGCCGGCTGAGACATAGAAACTTGGTTCAACTCATAGGGTGGTGCCATGAACAAGGTGAGCTGCTTCTAGTTTATGAATACATGCCAAATGGGAGCCTTGATTCTCATCTGTTTGGAAGTAGAGTCATGCTTTCATGGGTGGTGAGATACAAGGTGGCCTTAGGTTTGGCATCTGCTCTTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTGGTGCATAGAGATATTAAGTCAAGTAATGTCATGCTGGATGCAAATTTCAATGCCAAGCTTGGTGACTTTGGTCTTGCAAGGCTGGTAGACCATGAACTTGGTTCTCAAACCACTGTTTTGGCAGGCACAATGGGGTACCTAGCCCCAGAATGCGTCACCACAGGGAAATCCAGCAAGGAGTCTGATGTGTACAGCTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAAACCAGTGGAAGTGAGAGAAGAACCTAGTAAAGTTAGGCTTGTGGAGTGGGTGTGGAGCCTCTATGGAAAAGGGAAACTCCTTGAAGCAGCTGATAAGAAATTGAATTGGGAATTTGAAGAACAGCAAATGGAATGTTTGATGATTGTTGGGTTGTGGTGTTGTCATCCTGATCATACCATGAGGCCCTCCATTAGGCAAGTGATAAGTGTCCTCAATTTTGAAGCCCCTTTGCCCAGTCTTCCATCCCAATTGCCTGTGCCAATGTATTTTGCACCTCCAATGGAAATGTGCAAATTCTCCTACACTTCATCTGGCACTACAAGCACAATCAAAGAATCCTCCACATACTCATCAATATCGGAAGCGTCCGGAAAATCTCTATTATAG | 1662 | 0.4188 | MAFFTSASNSNQTQKQTLLFTFIIFTLFHTLFTTVVSISFNFSTFQQNLNNLIDFKGDAFSSNVTNVTWKSSIKNGSVANAWIWYNSTTKNLSVFLTYANNPTFNGNSSLWYVIDLRDVLPEFVRIGFSAATGSWIEIHNILSWSFSSNLEEGGRKKVKVGLVVGLSVGLGCLVCVVCLLWFTFWRRRNRGREDNIGLDASMDDEFERGTGPKRFTYRELSNATNNFAEEGKLGEGGFGGVYKGLIVNSNLEVAVKRVSKGSKQGKKEYVSEVRVISRLRHRNLVQLIGWCHEQGELLLVYEYMPNGSLDSHLFGSRVMLSWVVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRKPVEVREEPSKVRLVEWVWSLYGKGKLLEAADKKLNWEFEEQQMECLMIVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSQLPVPMYFAPPMEMCKFSYTSSGTTSTIKESSTYSSISEASGKSLL | 553 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g01350 | 553 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 212 | 303 | - | - | |
Pumo1g01350 | 553 | SMART | serkin_6 | 227 | 496 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo1g01350 | 553 | Gene3D | Phosphorylase Kinase; domain 1 | 212 | 303 | - | - | |
Pumo1g01350 | 553 | CDD | STKc_IRAK | 241 | 497 | - | - | |
Pumo1g01350 | 553 | Gene3D | Transferase(Phosphotransferase) domain 1 | 304 | 517 | - | - | |
Pumo1g01350 | 553 | Gene3D | - | 1 | 160 | - | - | |
Pumo1g01350 | 553 | ProSiteProfiles | Protein kinase domain profile. | 227 | 505 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo1g01350 | 553 | SUPERFAMILY | Protein kinase-like (PK-like) | 211 | 525 | IPR011009 | - | |
Pumo1g01350 | 553 | Pfam | Legume lectin domain | 1 | 152 | IPR001220 | GO:0030246 | |
Pumo1g01350 | 553 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 63 | 247 | IPR013320 | - | |
Pumo1g01350 | 553 | ProSitePatterns | Protein kinases ATP-binding region signature. | 233 | 256 | IPR017441 | GO:0005524 | |
Pumo1g01350 | 553 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 347 | 359 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo1g01350 | 553 | PANTHER | - | 32 | 506 | - | - | |
Pumo1g01350 | 553 | FunFam | Lectin-domain containing receptor kinase A4.3 | 304 | 516 | - | - | |
Pumo1g01350 | 553 | Pfam | Protein kinase domain | 228 | 493 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo1g01350 | 553 | ProSitePatterns | Legume lectins alpha-chain signature. | 120 | 129 | IPR000985 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g01350 | Pumo-Chr1 | 22304241 | 22306274 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g01350 | 61 | 514 | Receptor kinase-like Gene Family | AT5G10530 | 56.494 | 1.12e-179 | 520 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Pumo1g01350 | Pkinase | 2.1e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g01350 | - | - | gmx:100777201 | 898.271 |