Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01347 ATGGCAGTTCCACCAGAAATGGAGCATCCCAAGAAGGCTTTTGGATGGGCAGCTAGAGACACATCTGGGGTTCTCTCCCCATTCAAGTTCTCAAGAAGGGAAACAGGAGAGAAAGATGTAACATTCAAAGTGTTATATTGTGGTATATGCCACTCGGACCTCCATATGTTGAAGAACGAATGGGGCTTCTCCACTTATCCCCTAGTACCCGGGTATGCTTCCTATGATATTAACGCTGCAATGGGCACCTTGGATGGTATAATAGACACAGTTTCGGCCATTCATCCTCTGTCCCCTCTGCTTAGTTTGTTGAAGTCTCATGGAAAACTTGTCATGGTTGGTTTACCTGATAAGCCTTTGGAGCTACCAGTCTTTCCTTTACTTGCAGGATATTCCTAA 399 0.4511 MAVPPEMEHPKKAFGWAARDTSGVLSPFKFSRRETGEKDVTFKVLYCGICHSDLHMLKNEWGFSTYPLVPGYASYDINAAMGTLDGIIDTVSAIHPLSPLLSLLKSHGKLVMVGLPDKPLELPVFPLLAGYS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01347 132 Gene3D - 77 130 - -
Pumo1g01347 132 Pfam Alcohol dehydrogenase GroES-like domain 38 71 IPR013154 -
Pumo1g01347 132 PANTHER ALDEHYDE REDUCTASE 76 130 IPR047109 GO:0016616
Pumo1g01347 132 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 129 IPR036291 -
Pumo1g01347 132 FunFam Uncharacterized protein 2 72 - -
Pumo1g01347 132 Gene3D - 16 72 - -
Pumo1g01347 132 SUPERFAMILY GroES-like 7 72 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01347 Pumo-Chr1 22260703 22265431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01347 1 82 Monolignol Biosynthesis Gene Families AT4G39330 62.195 6.85e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01347 K23232 - mtr:11426261 191.045