Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01331 ATGTCTCAGATTTCCAATTATACAAAGGAATTGGAGGAGATGAAACATGTAGGAAAGCAAGAATTTATTGCATCACTGCGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTGCTTACAGGGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTTGCGGGAAACAAGGATCTGTACTTGGGAACATTTGCAACTGAAGAGGAGGCAGCAGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGCACAAATGCCGTAACCAATTTCGAGATGAACAGATACGACATGGAAGCTATATTGAACAGCTCTCTTCCAGTTGGTGGGGTTGCAAAGCGCTTGAAGCTTTCCCCAGAACAGGAGACCAAAGCTCTTGTTAGCACTAGCCAACAACCTCAGAATACAAACGCAAGTAGCAGCATCAATTTCTCAACCATTCAGCCAGTTGCTTCAATACCCTATGATTCTGCAAACACATGTTACCCCCACAACCTCTTCCACCATTTTCATCCCACCAACGGTGGAAGTAGCACATCAGAGCCTGCTGCTGCAACTGTGACCAATGCAACCGCACTCACTACCCTTCCACCACCACCAGTTCCTGGGTTCTTCATATGGCCTCATCAGTCCTTTTGA 654 0.4618 MSQISNYTKELEEMKHVGKQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGTNAVTNFEMNRYDMEAILNSSLPVGGVAKRLKLSPEQETKALVSTSQQPQNTNASSSINFSTIQPVASIPYDSANTCYPHNLFHHFHPTNGGSSTSEPAAATVTNATALTTLPPPPVPGFFIWPHQSF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01331 217 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 162 - -
Pumo1g01331 217 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 ProSiteProfiles AP2/ERF domain profile. 39 97 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 Gene3D AP2/ERF domain 39 99 IPR036955 GO:0003700|GO:0006355
Pumo1g01331 217 SMART rav1_2 39 103 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 CDD AP2 38 97 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
Pumo1g01331 217 SUPERFAMILY DNA-binding domain 38 98 IPR016177 GO:0003677
Pumo1g01331 217 FunFam AP2-like ethylene-responsive transcription factor 38 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01331 Pumo-Chr1 22040532 22042220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01331 4 137 AP2-EREBP Transcription Factor Family AT3G20840 75.735 7.37e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pumo1g01331 AP2 7.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01331 K09285 - gmx:100795280 345.51