Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01318 ATGGCGGAGCAAAGGAACAAGTGGAGCTGGGACGTCGCCGGCTTCGACCCGTGGAAGTCGTCGCCGCCGCCGCAGTCGCTGCCACCGGCGGCAGAGCACGGCGATCGGAAACCTAGTGCGCCGGTGGTGCGGCGGTACTCCATTTCGGCCACGTCGGTTCTTCCGCAACCGAAGCACTCCGTGGCCTTCAAGCTTCAGCGGCTGAAGGACAAAGTCAAGCTTGCTAAAGAAGACTATTTGCAATTAAGACAAGAAGCAAGTGAACTTCAGGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTGGGTGTTCTTGCAGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCTCCAGTGATCAATGAGAAAAGAAGGTTATTCAATGATTTATTAACATCTAAAGGAAACATACGAGTATTCTGTCGGACAAGGCCATTATTTGAAGATGAAGGTCCTTCGGTTGTTGAATTTCCAGATGATTATACCATTCGTGTAAATACTGGTGATGAATCCTTGTCTAATGCCAAGAAAGATTTTGAATTTGACCGAGTTTATGGACCTCATGTTGGTCAAGCTGACTTATTCAGTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAAACCCATTCCGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAATTGTTTGATTTAGCCAATTTAGATACAACCTCTACTTCTCGATATAAATTCTGTGTTACAGTTTGTGAGCTATATAATGAACAGACAAGGGATTTACTTGTGGAGGCAGGGAAAAGCACGCCTACACTCTGCTTGGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAAAAAGCTGATAACCCTCTTGAGTTTTCTGCAGTTTTAAAAACTGCATTGCAGACTCGGGAAAATGATTTATCAAAGAATAATGTATCTCATTTGATTGTCACGATACACATATTTTATAACAATTTGATCACTGGTGAAAACTCATATAGTAAGCTCTCTCTGGTTGATTTAGCTGGAAGTGAAGGTTTGATAACAGAAGATGATAGTGGTGACCGTGTCACAGATTTGCTGCATGTTATGAAGTCTCTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAAAGATATTATTCCTTATGAAAATTCGCTGCTAACAAAACTGCTTGCAGATTCACTTGGTGGGAGTTCAAAAACTCTGATGATTGTGAATGTGTGTCCAAGTATTTCAAATTTATCTGAGACATTGTCGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTATATTGAGCCTTGGAAACCGAGACACAATTAAAAAGTGGAGAGATGTTGCAAATGATGCACGAAAGGAGCTGTACGAGAAAGAAAAAGAAATCCATGATCTAAAGCAAGAGGGTCTGGAACTCAAGCAAGCGCTTAAAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTGCAGAAGGCATGGAAAGTTTCTTCTGCATTGCAGACCGATTTAAAGTCAGAACATGTTTTGCTGTCAGATAAACACAAGATAGAGAAAGAACAAAATAATCAGCTTAGAAATCAAGTTGCTCAACTTTTACAGTTAGAGCAAGATCAAAAATTGCAAATACAAGAGCAAGATTCAACCATCCAAAGTTTTCAGGCTAAAATTAGAACCCTTGAAACTCAACTCAATGAAGCTATTAAATCTAGTGAATCTAGGTCAACATTTGTCTCAGAGCCAGAGTCTGCTGATCAATCCAATTCCAGACCAACTGGAGATGGCATAGACTCTTCTGCAGTAACCAAAAAACTAGAAGAGGAACTCAAGAAACGTGATGCGCTGATTGAGAGGTTGCATGAAGAAAACGAGAAATTGTTTGATAGATTAACTCAGAAAGCATCTACGGCTGAATCACCTAAGTTGTCAAGTCCATTAGCTCGTGGATCAGCTAATGTTCAGCCTTGGGATATTGGAAGGAATGGCACCAACAACAATACAAGTTCTCGTTCTATGGATGTTCTTCCTTCACCTTTGGCCACTGATAAAAATGATGGCACGGTTGCTCTAGTTAAAACTGGCTCTGAAATAGTTAAGACTACCCCTGCAGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCAGATCAATATGAAGGGCATGCTGCCATATCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTCGCTGAAATTAGAGATTCTGTTTTCTCTTTTATTAGAAAGATGGAACCAAAACGAGTAATGGACACCATGCTTGTTTCCCGTGTTAGAATTCTGTATATAAGATCTTTGCTTGCTAGATCCCCAGAGTTGCAATCAATTAAGGTTTTGCCAGTTGAGTGCTTTCTTGAGAAGACTAATACTGGGCGCAGTAGAAGTTCTAGCCGAGGGAGTAGTCCTGGTAGGTCTCCTGTGTTATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATCTAAAGCCAGAAAAGAAATCCAAATTTTCTTCTGTTGTGTTGAAGATACGTGGGATTGATGAGGACATCTGGAGACAGCAAGTAACTGGTGGAAAGCTTAGGGAAATTACTGAGGAGGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTCCATACACCAGCAGGTGAGCTGCAGCGTCAAATTAGATCCTGGCTTGCTGAGAATTTTGAGTTTCTATCTTTAACTGGAGAAGATGCATCGGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCCGGTCTTGGTGCTGCTCTGCCTCCCCACACTGATGCCCTTGGCCAGCTATTGTTTGAATATTCAAAACGTGTCTATACTTCTCAACTACAACACTTGAAGGATATTGCTGGTACCTTGGCGACAGAGGAGGCTGAAGATGCAGCACAAGTAGCAAAGCTACGTTCTGCTCTAGAATCGGTTGATCATAAAAGAAGAAAGATTATGCAACAAATGAAAAGTGATGTAGCTTTATTGACGTTAGAAAATGGTGGTTCCCCTATTCAAAATCCTACTACTGCAGCTGAAGATGCACGATTAGCATCTCTAATTTCGCTTGATAGCATATTAAAGCAAATCAAGGATATAACAAGACTTTCTTCCGTGAACGTCTTGACCAAAAGTAAGAAGAAAACGATGCTTGCTTCTCTTAATGAATTAACAGAACAGATGCCTTCGCTTCTTGAAATTGATCATCCATGTGCTCAGAGGCACATTGCAGATGCTCGCTACATGGTTGAGTCAATTCCTGAAGAAGATGACCCCATTCAAGATAAGCCATCAACAAATCTGGGCTCTGGATCTGAAACTGACGTGGCACAGTGGAATGTCCTCCAATTTAATACTGGCTCGACCTCTCCATTTATTATAAAATGTGGTGCAAACTCTAATTCAGAACTAGTCATTAAAGCCGATGTACGAGTTCAGGAACCAAAAGGTGGTGAAATTGTGAGGGTTGCCCCTAGACCCTCCGTTCTGGAAAATATGAACTTGGATGAAATGAAACAAGTATTTAATGAACTACCTGAGGCTCTAAGCTTGCTTGCTCTAGCAAGGACTGCAGATGGCACTCGGGCACGATATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCGTCGCTTAAGGATTTGGTCAATGAGCTCGAAAAAGGGGGTGCCCTCAAAGATGTGAGAACATGA 3864 0.4177 MAEQRNKWSWDVAGFDPWKSSPPPQSLPPAAEHGDRKPSAPVVRRYSISATSVLPQPKHSVAFKLQRLKDKVKLAKEDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPVINEKRRLFNDLLTSKGNIRVFCRTRPLFEDEGPSVVEFPDDYTIRVNTGDESLSNAKKDFEFDRVYGPHVGQADLFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSRYKFCVTVCELYNEQTRDLLVEAGKSTPTLCLGSPECFVELVQEKADNPLEFSAVLKTALQTRENDLSKNNVSHLIVTIHIFYNNLITGENSYSKLSLVDLAGSEGLITEDDSGDRVTDLLHVMKSLSALGDVLSSLTSKKDIIPYENSLLTKLLADSLGGSSKTLMIVNVCPSISNLSETLSSLNFSARARNSILSLGNRDTIKKWRDVANDARKELYEKEKEIHDLKQEGLELKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHVLLSDKHKIEKEQNNQLRNQVAQLLQLEQDQKLQIQEQDSTIQSFQAKIRTLETQLNEAIKSSESRSTFVSEPESADQSNSRPTGDGIDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTQKASTAESPKLSSPLARGSANVQPWDIGRNGTNNNTSSRSMDVLPSPLATDKNDGTVALVKTGSEIVKTTPAGEYLTAALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKTNTGRSRSSSRGSSPGRSPVLYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDEDIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFEFLSLTGEDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKIMQQMKSDVALLTLENGGSPIQNPTTAAEDARLASLISLDSILKQIKDITRLSSVNVLTKSKKKTMLASLNELTEQMPSLLEIDHPCAQRHIADARYMVESIPEEDDPIQDKPSTNLGSGSETDVAQWNVLQFNTGSTSPFIIKCGANSNSELVIKADVRVQEPKGGEIVRVAPRPSVLENMNLDEMKQVFNELPEALSLLALARTADGTRARYSRLYRTLATKVPSLKDLVNELEKGGALKDVRT 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01318 1287 ProSiteProfiles Kinesin motor domain profile. 145 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 SMART kinesin_4 143 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 MobiDBLite consensus disorder prediction 597 624 - -
Pumo1g01318 1287 Coils Coil 469 510 - -
Pumo1g01318 1287 PRINTS Kinesin heavy chain signature 217 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 PRINTS Kinesin heavy chain signature 360 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 PRINTS Kinesin heavy chain signature 409 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 Coils Coil 630 653 - -
Pumo1g01318 1287 ProSitePatterns Kinesin motor domain signature. 359 370 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo1g01318 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 501 IPR027417 -
Pumo1g01318 1287 Coils Coil 543 598 - -
Pumo1g01318 1287 Gene3D Kinesin motor domain 89 459 IPR036961 -
Pumo1g01318 1287 PANTHER KINESIN-LIKE PROTEIN KLP-3 540 1232 IPR027640 GO:0003777|GO:0007018
Pumo1g01318 1287 MobiDBLite consensus disorder prediction 597 628 - -
Pumo1g01318 1287 FunFam kinesin-like protein KIN-14B isoform X1 92 460 - -
Pumo1g01318 1287 Pfam Kinesin motor domain 151 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g01318 1287 MobiDBLite consensus disorder prediction 655 707 - -
Pumo1g01318 1287 Coils Coil 65 92 - -
Pumo1g01318 1287 MobiDBLite consensus disorder prediction 660 703 - -
Pumo1g01318 1287 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01318 Pumo-Chr1 21911957 21927828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01318 132 460 Calmodulin-binding Proteins AT5G65930 37.318 2.49e-51 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01318 - - gmx:100796816 2352.4