Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01317 ATGAGACAAGAACCCGACACAGACAACAGCAACAACAACGGAACCCACCACGGGTCCGAATCCGTATCCGCACCCGATTCCCTCCTCCGCCCCTGCCTCTCCCTCCTCACTCGCCGCAACTTCACCGCCTGCCGCAAGTCCGCAAACCGGATCTCCAGATCCGACCCGACCGCCTCCCTCCAGGCCGACCAAATCCTCGCCGTCGCCGACGTCCTCTCCGCCGCGGAGCGCCGCCGCGGCCCCGACCACGACCACGACTGGTACTCCATCCTCCGCCTCCGCCCCGGCGACGCCGACAACCGCGACCTCGCCCGGCACCACTTCAAGACCCTCGTGCGGCTCCTCGACCCGAATAAAAACAAGTTACCCTTCGCCGACGAGGCCCTCATGCGCGTGCGCGAAGCGTGGTGCGTACTCTCCGACCCCGCGCGTAAGGCCCGCTTCGACCGCGAGATCCAACACGCCACCGCCACCGCCACCGCCACCGCAACGGCATCGTTTTGGACAATGTGCCCTTACTGCTGGTACCTGCACGAGTACGAGAGGCGCTACGAGGATTGCACTTTGAGGTGTTCCAATTGCCAGAGGACTTTTCACGGCGCGGCGGTGAAGCCTCCGCTGCCGGAGTCGGTGGTGGCGGGGAAGGACGAGTATTACTGTTACCACGTGAGTGTGCCGGTTAGGTATCCGTTTAGTGAACGGTGTCGTTTTGGGGAAGAGGGGAATGGGACGAGGAAGAGGCCTAGGATTAAAACGGTGGCGAATAGAATGAAAATGAAAGGGATTGTTGATGGCAATAGTGACTCGGATTTGGAGTAA 819 0.6166 MRQEPDTDNSNNNGTHHGSESVSAPDSLLRPCLSLLTRRNFTACRKSANRISRSDPTASLQADQILAVADVLSAAERRRGPDHDHDWYSILRLRPGDADNRDLARHHFKTLVRLLDPNKNKLPFADEALMRVREAWCVLSDPARKARFDREIQHATATATATATASFWTMCPYCWYLHEYERRYEDCTLRCSNCQRTFHGAAVKPPLPESVVAGKDEYYCYHVSVPVRYPFSERCRFGEEGNGTRKRPRIKTVANRMKMKGIVDGNSDSDLE 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01317 272 CDD DnaJ 86 141 IPR001623 -
Pumo1g01317 272 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 24 248 - -
Pumo1g01317 272 Pfam DnaJ domain 86 149 IPR001623 -
Pumo1g01317 272 MobiDBLite consensus disorder prediction 1 22 - -
Pumo1g01317 272 SUPERFAMILY Chaperone J-domain 82 152 IPR036869 -
Pumo1g01317 272 SUPERFAMILY FYVE/PHD zinc finger 166 221 IPR011011 -
Pumo1g01317 272 ProSiteProfiles dnaJ domain profile. 86 152 IPR001623 -
Pumo1g01317 272 MobiDBLite consensus disorder prediction 1 25 - -
Pumo1g01317 272 Gene3D DnaJ domain 81 166 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01317 Pumo-Chr1 21907467 21908684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01317 23 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.036 2.86e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01317 - - gmx:102659715 421.394