Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01305 ATGGTGGGCCCCTATCCCTCCCATGCCCACAATTCCACCCTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCCCGTTATCCCGACGGCAAGCTCCGTTACTTGGGCGGCCACACCCGCGTCCTCGCCCTCCCTCGCTCCACTCCCTTCTCCGAACTTATGGTGAAGTTGGGAGAACTGTGCGGCGCACACGTGACTCACCTCCGTTGCCAATTACCCACCGAAGACCTCGACGCTTTGGTTTCCATCACCTGTGACGAGGACCTCAATAACCTCGTCCAGGAATACGACCGCGTTTCGTCTCTGAAAATCAGAGCCTTCCTTTCCTCTTCGCCCACGTCCACGTCCACGTCGTCTTGTTCATCTTCTTCTTCGTCTACGTCCTCTACGACGCTGTCGTTTTGCTGCCATACCGTTACGGCGCCGAAGCCGGTGAAGAAGAAGAAGGCTAATGTTCCTCTTCCCTGTCCCTGCTACTATGGTTATATTCCCCGCGCTCAGGGGAATCGCGGTGTCGTTTACCGCCTCGTCCCCAACGGCAACAACCACTGGCACTAG 561 0.5704 MVGPYPSHAHNSTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLALPRSTPFSELMVKLGELCGAHVTHLRCQLPTEDLDALVSITCDEDLNNLVQEYDRVSSLKIRAFLSSSPTSTSTSSCSSSSSSTSSTTLSFCCHTVTAPKPVKKKKANVPLPCPCYYGYIPRAQGNRGVVYRLVPNGNNHWH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01305 186 PANTHER OS05G0427100 PROTEIN-RELATED 11 126 - -
Pumo1g01305 186 Pfam PB1 domain 30 110 IPR000270 GO:0005515
Pumo1g01305 186 MobiDBLite consensus disorder prediction 111 131 - -
Pumo1g01305 186 Gene3D - 32 112 - -
Pumo1g01305 186 SUPERFAMILY CAD & PB1 domains 30 119 - -
Pumo1g01305 186 SMART PB1_new 28 110 IPR000270 GO:0005515
Pumo1g01305 186 CDD PB1_UP2 17 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01305 Pumo-Chr1 21736903 21737868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01305 7 112 MAP Kinase Kinase Kinase AT2G35050 48.214 2.38e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01305 - - gmx:100786933 238.039