Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01285 ATGGATCTAGAACTCCCTGCAGCTGCAACTGTCAATGAATCTCAGCAACAAAAGTTTGCTCTACCTGTGGATTCTGAGCACAAGGCCACTGAGTTCAGATTATTTTCCATAGCCAAGCCCCACATGAGGGCTTTCCACCTATCATGGGTCTCTTTCTTCGCATGCTTTGTGTCTAGCTTTGCTGCACCACCCCTCCTTCCCATAATCCGCGACAACCTCAACCTCACAGCCACTGACATTGGAAATGCCGGAGTGGCATCAGTCTCAGGTGCTGTTTTCGCAAGAATTGCGATGGGAACAGCTTGTGACTTGGTTGGACCACGCCTCGCCTCTGCATCACTCATCCTCCTCACATCACCATTTGTGTACTTCACTTCCATCATCAACTCAGCCACCTCTTATCTTCTAGTCCGGTTCTTCACCGGCTTCTCCCTTGCCACCTTCGTGTCCACGCAGTTCTGGATGAGCTCCATGTTCTCTGCTCCGGTGGTCGGTTCGGCCAACGGATTCTCCGGTGGATGGGGGAACCTTGGAGGAGGGGCTACCCAACTCATCATGCCCCTTGTGTTCTCCCTCATCCGCGACATTGGCGCCACCAAATTCACTGCTTGGAGGATTGCATTCTTTGTCCCTGCCATGTTCCAAATGCTCACAGCATTCTCAATTCTGATTTTTGGCCAGGACATGCCTGATGGCAACTTCCACCGCTTGAAGAAGTCAGGGGACAAGGCCAAAGATGATTTCTCAAAGGTGTTGTATCATGGTGTTACAAACTATAGGGGGTGGATTCTGGCGTTGACTTATGGCTACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATAGCTGAGTACTTCTATGACAGGTTTAATCTGAAACTTCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTGGCGAACCTATTTTCTAGGCCTGGTGGGGGTTATATATCTGATTTGATGGCAAAGAGGTTTGGCATGAGGGGGAGATTATGGGTCTTGTGGATATGCCAAACCTTGGCTGGTGTGTTCTGCATAATCCTTGGCCTGGTGGGATCTTTAAGTGTATCTGTTGTTGTTATGATCATATTCTCTGTGTTTGTCCAAGCTGCATGTGGAATGACCTTTGGGATTGTTCCCTTTGTCTCAAGAAGGTCATTAGGGGTCATATCTGGAATGACTGGAGGAGGAGGCAATGTGGGTGCAGTTTTGACCCAGCTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGAGGAATAACTCTAATGGGAATCATGATCATAATATGCACCCTGCCAATATGTTTAATCTACTTTCCACAATGGGGTGGGATGTTTTCTGGTCCTTCATCTAAAAAGGTCACAGAAGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGAAGGAAAAAGGCTCCCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGTGAAAGAGGCAGAAAATTGAACACATCAACCGAGCCTACTGAGGAAATCACACCCCCACATGTTTGA 1530 0.4725 MDLELPAAATVNESQQQKFALPVDSEHKATEFRLFSIAKPHMRAFHLSWVSFFACFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTSPFVYFTSIINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPDGNFHRLKKSGDKAKDDFSKVLYHGVTNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGYISDLMAKRFGMRGRLWVLWICQTLAGVFCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFKGSKFSKERGITLMGIMIIICTLPICLIYFPQWGGMFSGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRSERGRKLNTSTEPTEEITPPHV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01285 509 Gene3D MFS general substrate transporter like domains 243 445 IPR036259 -
Pumo1g01285 509 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 493 IPR044772 GO:0015112
Pumo1g01285 509 Gene3D MFS general substrate transporter like domains 36 234 IPR036259 -
Pumo1g01285 509 MobiDBLite consensus disorder prediction 469 509 - -
Pumo1g01285 509 FunFam High affinity nitrate transporter 2.5 37 233 - -
Pumo1g01285 509 FunFam Nitrate transporter 2.1 245 446 - -
Pumo1g01285 509 CDD MFS_NRT2_like 45 438 IPR044772 GO:0015112
Pumo1g01285 509 MobiDBLite consensus disorder prediction 469 497 - -
Pumo1g01285 509 Pfam Major Facilitator Superfamily 49 405 IPR011701 GO:0022857|GO:0055085
Pumo1g01285 509 SUPERFAMILY MFS general substrate transporter 34 441 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01285 Pumo-Chr1 21409071 21412089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01285 17 500 Inorganic Solute Cotransporters AT1G12940 75.207 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01285 K02575 - gmx:100787888 901.738