Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01284 ATGCCTTCTTCTTCTGCGGTTTCCTTTCTGTTTCTCTTCCTCTGTTTCTTCGCACCTTATGCACTATCCGACCCAAGAGCCCAGAGAGCCGCGCTGCTATGCACGAACCGCACCGTCTCGTCCCTCTCCCGGCGCCAGGTGTTCATCGCGAACTTTCTGGCGGCGATGGACGCGCTGACCCCTCTCACGACGGCGCAGGGCCACGGCGCCGTCTTCAACGGCTCCCGAAACGCCACCGTTTTCGCCTTCGGCGAGTGCATGAGGGACCTCTCGCGGCCCGACTGCAACGTGTGCCTGGCGCAGTGCAAGACGCAGCTCCTCGCCTGCCTCCCCTTCCAGAGAGGGACACGTGGCGGCCGCCTCTTCTTCGACGGCTGCTACCTCCGCTACGACGACTACAACTTCTTCGGCGAGAGCCAAAGCAACCAAGACACTACAGTGTGTGGCACCATGAATGGAACTAATAATAACAATAATAATAGTGCTGCTAATAGTAGTAGTATTTATAAGGCTAATGCTTTGGCGTTGGTTCGGAACCTGAGCGAGTTGGCGCCAAAAAACGATGGTTTTTTCGTTGGATCGGTTACTAGAAGGAATGTGAGTGTTTATGGATTGGCTCAGTGCTGGGAGTTTGTGAATGGCAGTGCCTGCCAGAGATGTTTGGAGGATGCTGTCACGAGGATTGCTTCGTGTGCAACGCAAGAAGCGAGGGCGTTGAATGCTGGTTGCTACTTGAGGTTTTCTGCGCAGAAGTTTTATAACAATTCGAGCGATGCTGCAACCGCTGGAAACCATGGAAAACGGAGTCTAGCTAAAATTCTGGCTGCGTCTTCTGCTGCCCTGGCTCTTCTGTTAGTTGTTGCAACAGTAGTTTTCTTTATAAGGAAGAATGTGGTGACAAAGAGAAGAGAAAGAAGACAGTTTGGTGCTCTTCTGGACACAGTGAATAAGTCCAAGCTAAATGTGCCTTATGAGATTCTTGAAAAAGCAGCAAATTACTTCAATGATGCCAACAAGCTAGGACAAGGGGGGTCAGGTTCTGTTTATAAAGGAGTTATGCCAGATGGATCTACAGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCGGATCATTTCTTCAATGAGGTCAATTTGATTAGTGGCATTCATCACAAAAATCTAGTAAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCCATGATCACCTTTCTGTTAGAAGGATTTCTCAACCGCTTAGTTGGGAAATCAGGCATAAGATCATATTAGGAATTGCAGAGGGCATGGCCTACCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGACATAAAATTAAGCAACATTCTTCTTGAGGAGGACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGACAAGTCTCACATTAGCACAGCCATTGCTGGCACACTGGGTTATATGGCTCCGGAGTATGTTGTTCGTGGGAAGTTGACTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTAGTTATTGAAATTATATCTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAATGGTTTGGAGCCTCTATGGATCAAAGAGGCTATCTGAAGTTGTTGATCCGACCCTAGAGGGTGCTTTTCCTGCAGAGGAAGCATGCCAACTGCTTCAGATAGGGTTGCTTTGTGCACAAGCATCTGCAGAGCTGAGACCATCAATGTCAGTAGTAGTTAAAATGGTTAATAACAATCATGAAATTCCTCAGCCCACACAACCGCCATTTATTAGTGCTGGTAGTTCAGAACACAGCCAATCTGGTTTACCTGGTTATAATTTTCAGCCTGGATCCAGCACTCAGTCTTCACGGAACACCATGACTGAAAGTCAGATTGAGCCTAGATGA 1968 0.4695 MPSSSAVSFLFLFLCFFAPYALSDPRAQRAALLCTNRTVSSLSRRQVFIANFLAAMDALTPLTTAQGHGAVFNGSRNATVFAFGECMRDLSRPDCNVCLAQCKTQLLACLPFQRGTRGGRLFFDGCYLRYDDYNFFGESQSNQDTTVCGTMNGTNNNNNNSAANSSSIYKANALALVRNLSELAPKNDGFFVGSVTRRNVSVYGLAQCWEFVNGSACQRCLEDAVTRIASCATQEARALNAGCYLRFSAQKFYNNSSDAATAGNHGKRSLAKILAASSAALALLLVVATVVFFIRKNVVTKRRERRQFGALLDTVNKSKLNVPYEILEKAANYFNDANKLGQGGSGSVYKGVMPDGSTVAIKRLSFNTTQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRISQPLSWEIRHKIILGIAEGMAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLVIEIISGKRNSSFIMNSSSLLQMVWSLYGSKRLSEVVDPTLEGAFPAEEACQLLQIGLLCAQASAELRPSMSVVVKMVNNNHEIPQPTQPPFISAGSSEHSQSGLPGYNFQPGSSTQSSRNTMTESQIEPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01284 655 ProSiteProfiles Gnk2-homologous domain profile. 150 252 IPR002902 -
Pumo1g01284 655 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01284 655 Pfam Salt stress response/antifungal 34 133 IPR002902 -
Pumo1g01284 655 Pfam Salt stress response/antifungal 158 249 IPR002902 -
Pumo1g01284 655 Gene3D Phosphorylase Kinase; domain 1 294 409 - -
Pumo1g01284 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 641 - -
Pumo1g01284 655 FunFam Cysteine-rich receptor-like protein kinase 2 27 135 - -
Pumo1g01284 655 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Pumo1g01284 655 ProSiteProfiles Protein kinase domain profile. 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01284 655 FunFam Cysteine-rich receptor-like protein kinase 2 410 610 - -
Pumo1g01284 655 SUPERFAMILY Protein kinase-like (PK-like) 320 623 IPR011009 -
Pumo1g01284 655 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Pumo1g01284 655 CDD STKc_IRAK 340 604 - -
Pumo1g01284 655 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Pumo1g01284 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pumo1g01284 655 Gene3D - 150 252 IPR038408 -
Pumo1g01284 655 Gene3D - 29 135 IPR038408 -
Pumo1g01284 655 FunFam Cysteine-rich receptor-like protein kinase 3 146 252 - -
Pumo1g01284 655 FunFam Putative DUF26-domain receptor-like protein kinase family protein 294 409 - -
Pumo1g01284 655 Pfam Protein kinase domain 335 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01284 655 MobiDBLite consensus disorder prediction 609 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01284 Pumo-Chr1 21394789 21399241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01284 21 499 Receptor kinase-like Gene Family AT1G70530 59.792 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo1g01284 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01284 - - gmx:100787359 1112.44