Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01283 ATGGAGAAAACAGTCCCTCTTGTCTATTTCCACTGCCTTGTTTTCATTCTCATGAAGCATGTATTGCTATCAAAAACCGTGATGGCAGAGCCAAGAGCCAAAACTGTCAACATAACATGTAACAATAAGCTAGAGCACAACACCACTATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAGATCAGTGAACAGATGCGCACCACTGGTTATGGCACAGCAGTTGTAGGGACAGGAGGACCTGACACTAACTATGGTTTGGCTCAGTGCTATGGTGATCTCTCATTACTTGACTGTGTGTTATGTTATGCCGAGGCCCGCACGGTTCTTCCCCAATGCTTCCCTTACAATGGTGGTCGCATATACCTTGATGGCTGCTTCATGAGGGCTGAAAACTATAGCTTCTATGATGAGTACACAGGACCAGGGGACAAGGCTGTTTGTGGAAAAACAACAAGGAAGAGCACAGGTTTTCAAGCTACAGCAAAGAAGGCTGTTTTAAATGCTGTTCAAGCTGCACCTAACAATAAAGGGTATGCTAGGGAGGAGGTTGCTGTGGCAGGAGCAGCAAATGGTTCAGCTTATGTTCTGGCTAATTGTTGGAGGAGCTTGGACACAAAGTCTTGTAGAGCTTGTCTTGAGAATGCATCTTCTTCAATATTGGGGTGCTTGCCCTGGTCAGAAGGGAGAGCACTGAACACTGGATGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAACAGGAAAATGGAAGTTCAGGAGGCAATGTACTAGTGATGGTGGTTGCAGTAGTCAGTTCAGTGATTGTTTTGGTGGTTGGAATAGCTATTGTGCTTTATATCCGCAAGCACAGATACATTCAAATGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTAGCTAAGAGCCTTCACCACAACAGCTTGAACTTCAAGTACTCTACACTGGAGAAGGCTACTAATTCTTTTCATGAAGCTAACAAGCTTGGACAAGGAGGATTTGGAACGGTTTATAAAGGAGTTCTGGCTGATGGAAGAGAGATTGCTATCAAGAGATTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGCAGTGTGGAACACAAGAATCTAGTCAGACTCTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTATATATGAATATCTACCTAATAGAAGTCTTGATCGTTTCATATTTGATAAAAACAAGGGTAGGGAACTAAACTGGGACAAGAGATATGACATTATCATCGGGACAGCTGAGGGATTGGTTTACCTGCATGAGAACTCCAACATTAGGATAATCCACAGAGATATAAAAGTCAGCAACATCTTATTGGATGCAAAGCTTCGCGCTAAAATTGCTGATTTTGGTCTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGTACAGCTATTGCTGGAACATTGGGTTATATGGCTCCAGAGTACCTAGCACATGGTCATTTAACAGAGAAAGCAGACGTATATAGCTTTGGAGTGTTACTGCTAGAAATAATTACTGGGAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGTCTAGTTACAATGACATGGAAGCATTTTCAGTCAGGGACTGCAGAACAATTAATTGATCCATGTCTAGTGTTGGATGACAACCATAGAAGCAATGTTAAGAATGAGATTTTAAGAGTGTTGCACATAGGACTTCTATGCACCCAAGAAATCCCTTCCTTAAGACCATCCATGTCAAAGGCACTAAAGATGCTAACAAAGAAGGAGGAGCACTTGGAATTGGAAGCTCCTTCCAATCCACCCTTCATAGATGAAAGTACCATGGAACTCCATGACCAAAATGATGACCCATTTTACCCTCTCAATGCAGCAGACTCATTGGCTACTATGTCTCATAGCTCATTTTATCCCAGGTAA 1962 0.42 MEKTVPLVYFHCLVFILMKHVLLSKTVMAEPRAKTVNITCNNKLEHNTTIFVPNFVATMEKISEQMRTTGYGTAVVGTGGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFYDEYTGPGDKAVCGKTTRKSTGFQATAKKAVLNAVQAAPNNKGYAREEVAVAGAANGSAYVLANCWRSLDTKSCRACLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKEQENGSSGGNVLVMVVAVVSSVIVLVVGIAIVLYIRKHRYIQMKRRGSNDAEKLAKSLHHNSLNFKYSTLEKATNSFHEANKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLIYEYLPNRSLDRFIFDKNKGRELNWDKRYDIIIGTAEGLVYLHENSNIRIIHRDIKVSNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGHLTEKADVYSFGVLLLEIITGRQNNRSKASEYSDSLVTMTWKHFQSGTAEQLIDPCLVLDDNHRSNVKNEILRVLHIGLLCTQEIPSLRPSMSKALKMLTKKEEHLELEAPSNPPFIDESTMELHDQNDDPFYPLNAADSLATMSHSSFYPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01283 653 Gene3D Transferase(Phosphotransferase) domain 1 401 614 - -
Pumo1g01283 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 630 - -
Pumo1g01283 653 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Pumo1g01283 653 SUPERFAMILY Protein kinase-like (PK-like) 308 629 IPR011009 -
Pumo1g01283 653 ProSiteProfiles Importin-beta N-terminal domain profile. 499 578 IPR001494 GO:0006886|GO:0031267
Pumo1g01283 653 SMART serkin_6 325 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01283 653 FunFam Cysteine-rich receptor-like protein kinase 2 33 135 - -
Pumo1g01283 653 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Pumo1g01283 653 FunFam Cysteine-rich receptor-like protein kinase 2 401 608 - -
Pumo1g01283 653 FunFam Cysteine-rich receptor-like protein kinase 3 144 245 - -
Pumo1g01283 653 CDD STKc_IRAK 331 602 - -
Pumo1g01283 653 ProSiteProfiles Protein kinase domain profile. 325 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01283 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pumo1g01283 653 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pumo1g01283 653 FunFam Putative DUF26-domain receptor-like protein kinase family protein 286 400 - -
Pumo1g01283 653 Pfam Salt stress response/antifungal 47 133 IPR002902 -
Pumo1g01283 653 Pfam Salt stress response/antifungal 153 242 IPR002902 -
Pumo1g01283 653 Gene3D - 145 245 IPR038408 -
Pumo1g01283 653 Gene3D - 32 135 IPR038408 -
Pumo1g01283 653 Pfam Protein kinase domain 325 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01283 653 Gene3D Phosphorylase Kinase; domain 1 286 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01283 Pumo-Chr1 21387030 21392344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01283 5 653 Receptor kinase-like Gene Family AT1G70520 66.667 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo1g01283 Pkinase 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01283 - - gmx:100818343 1214.52