Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01253 ATGAGTACAAAACTTAACGAAGAGGACGATGATTCTTCTTCTCCATCTAAACCTAACAAAGATAAAAAGAAACAAAAGAGTTCTCATGATGACAAGGATTCAGCTCCATCACCAAAGTCTCCTGATTCAGATTCTCAAGAGAGCGCTCCGTCCGAGTCTCCACCACCATCACCACTGCCACAGCCATCACCACCACCTTGGTTGAAACAACCAATATCATCACCACCTCGATTGAAACTTTTATCACCACCATTGTTGTCACCACCACCATCAAAAGATTTAAGTCCATCACCATCACCACCACCTCAATCATCACCCCCGCCACCCTCACCATTGCCACCTTTACCGCCACCACCCTCATTGCCACCGCCTTCTTCGCCACCACCTTCATCGTCACCAATATCACCTTTGTCGCCACAGTCACAATCATTGCCACTTCTCAGTGGCAATTCTTTCCCTCCTCCTTATTTTCCACGTAAACAATCATCACCACTACCGTCGCCACCACAATTTCATGCTCCATCTCCCCTTGATAGGCCTTCTTCGCGACCTCAGCGTAATGCACCCTCCAATGATTCATCAACCCCGGGAACCTCTGACATGCCACAATCAAGCCACCAAGCCCAGCATGACGTTGCTTCCCATGCAAACTCAACGGGTTCTTCTCCCGCCTCCTCCTCTTCTTCTGGTGATAACTCAGGAAAATATGTTGGCTATACACTCGCTGGGATTTTTGCTGTTGCCTTGGTTGCTGTAGCTGTAGCTCTTGTTTTTGCATTTAAGAGGAAGAAATCAAGAGGGGATGTCTATGCTACACCTTACATGCCACCCCTTAATATTCATGTAAAATCAGGTGCTAATGGGCATTACTATGTACAGCAGCCTATCACATCACCTCCCCTTGCAAACAACTATGGAAATGGGAATGTGAGCATGAACCATTTAGGAGCTTCTTTAGACTCAGCTCAGTTCAAAAGTGCTCAGATAGTTTTTACCTATGAGATGGTTATGGAAATGACCAATGCATTTTCTAGTCAAAATGTTATTGGGGAAGGAGGGTTTGGATGTGTTTACAAAGGTTGGCTGCCGGATGGAAAAGCAGTTGCAGTAAAGCAGCTTAAGGCTGGCAGTGGCCAGGGAGAAAGGGAATTCAAGGCCGAAGTGGAGATCATCAGCCGAGTTCATCATCGGCATTTGGTGGCATTGGTTGGTTATTGCATATGTGAGCAGCAAAGAATTCTTATCTATGAGTATGTTCCTAATGGAACACTCCATCATCACTTGCATGCAAGTGGAATGCCGGTGTTGGATTGGACCAAGAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATAAAGTCCGCAAACATACTTTTGGATAATGCTTATGAGGCACAGGTTGCTGACTTTGGACTTGCGAGGTTAGCCGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTTCTTGAGCTTGTTACGGGAAGGAAACCGGTTGATCAAACTCAGCCTTTGGGAGATGAAAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAATTGAGACACGCGATTTTAGTGATCTAATAGATCCAAGACTCCAAAAACACTTTGTGGAGAGTGAAATGTTCAGAATGATTGAGGCAGCCGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATTGTGGAGATGAAAGTTCTGATCTATCTAATGGGGTGAAATATGGTCATAGCACGGTTTATGATTCTGGCCAATATGATAAAGAAATTATGCTATTCAGGAGGATGGCCAATGGCACCTTTGTTGATTCTGATTTTGATATGTATAGTAGAGAATACAGTTTGTCAAGAGACACCTCAATGACCTCAAGAGGATCTCAACAAGAATTGATACGGCATAGTTCTAGTGGCGAGTCAGAATCTAGAGCCATCACCATGCATAGGAGCAGTACTGAATGA 2127 0.4532 MSTKLNEEDDDSSSPSKPNKDKKKQKSSHDDKDSAPSPKSPDSDSQESAPSESPPPSPLPQPSPPPWLKQPISSPPRLKLLSPPLLSPPPSKDLSPSPSPPPQSSPPPPSPLPPLPPPPSLPPPSSPPPSSSPISPLSPQSQSLPLLSGNSFPPPYFPRKQSSPLPSPPQFHAPSPLDRPSSRPQRNAPSNDSSTPGTSDMPQSSHQAQHDVASHANSTGSSPASSSSSGDNSGKYVGYTLAGIFAVALVAVAVALVFAFKRKKSRGDVYATPYMPPLNIHVKSGANGHYYVQQPITSPPLANNYGNGNVSMNHLGASLDSAQFKSAQIVFTYEMVMEMTNAFSSQNVIGEGGFGCVYKGWLPDGKAVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVALVGYCICEQQRILIYEYVPNGTLHHHLHASGMPVLDWTKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDNAYEAQVADFGLARLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGDESLVEWARPLLLRAIETRDFSDLIDPRLQKHFVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDCGDESSDLSNGVKYGHSTVYDSGQYDKEIMLFRRMANGTFVDSDFDMYSREYSLSRDTSMTSRGSQQELIRHSSSGESESRAITMHRSSTE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01253 708 MobiDBLite consensus disorder prediction 180 232 - -
Pumo1g01253 708 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Pumo1g01253 708 MobiDBLite consensus disorder prediction 673 708 - -
Pumo1g01253 708 MobiDBLite consensus disorder prediction 1 38 - -
Pumo1g01253 708 Gene3D Phosphorylase Kinase; domain 1 307 418 - -
Pumo1g01253 708 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 246 670 IPR047117 -
Pumo1g01253 708 MobiDBLite consensus disorder prediction 157 175 - -
Pumo1g01253 708 Gene3D Transferase(Phosphotransferase) domain 1 419 633 - -
Pumo1g01253 708 SMART serkin_6 343 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01253 708 MobiDBLite consensus disorder prediction 1 232 - -
Pumo1g01253 708 MobiDBLite consensus disorder prediction 51 135 - -
Pumo1g01253 708 FunFam Proline-rich receptor-like protein kinase PERK8 316 418 - -
Pumo1g01253 708 CDD STKc_IRAK 349 617 - -
Pumo1g01253 708 SUPERFAMILY Protein kinase-like (PK-like) 323 616 IPR011009 -
Pumo1g01253 708 ProSiteProfiles Protein kinase domain profile. 343 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01253 708 PRINTS Proline rich extensin signature 107 132 - -
Pumo1g01253 708 PRINTS Proline rich extensin signature 34 55 - -
Pumo1g01253 708 PRINTS Proline rich extensin signature 58 74 - -
Pumo1g01253 708 PRINTS Proline rich extensin signature 88 105 - -
Pumo1g01253 708 FunFam proline-rich receptor-like protein kinase PERK8 419 631 - -
Pumo1g01253 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pumo1g01253 708 Pfam Protein tyrosine and serine/threonine kinase 346 616 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01253 Pumo-Chr1 21086877 21092739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01253 231 691 Trihelix Transcription Factor Family AT1G70460 62.630 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pumo1g01253 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01253 - - gmx:100797563 957.207