Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01240 ATGAAGGGAGATAGGATTGAAGAGAGTAGTACAAGGTTGTTGGGTAGAAGCAGCAGTGGTGGAAGCAGTGAGTCAAGGTGGGTTGATGGAAGTGAAGTGGACTGGGATGAGGTTCCTATGTGGTCAAAGCATGATGATGGTAGAGAAGGGTATGGTTCAATCAGGAGGAGGCTTGCCAAGAAGCCCAAGAGAGTTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAACTCATGCTCACCACTCCAAGGACCTTTCCCTCTGGCCCACTCTTGCATTGGCATTTAAGACACTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGGATCAGATGCTGATATCTTGGGGGCATTATCATTAGTAATGTATACAATAGCACTTATTCCATTAGCAAAATATGTTTTTATAGTCCTCAAAGCAAATGATAATGGAGAAGGAGGAACGTTTGCACTATACTCACTGATTTGCAGGTATGCAAATGTGAGTCTGCTTCCAAATCGTCAACAAGCTGATGAACATATCTCTAGTTTTAAGCTCAAACTGCCTACTCCAGAACTGGAAAGGGCTTTAAGAATAAAGGAGACTTTGGAAAGGAAATCATTTTTGAAAAATGTATTATTGGTGTTGGTTCTTCTGGGAGCTTCCATGGTTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTGCAGGATCAAATAGAGGAAATTGGTACTGGTGAAGTGGTTGGTGTTTCTATTGTAGTCCTGGTGGCTTTGTTCAGCATACAACGGTTTGGTACCAGTAAAGTGGGTTTCATGTTTGCCCCTATACTTGCCTTATGGTTCTTTTCTCTGGGTTCCATTGGAATATATAATATACTTAAATATGATATCACTGTTCTGAGAGCATTCAATCCGGCTTATATCTATTATTTCTTCAAGAATAATGGCAAAGATGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCATTCACTTGTGTGGTATTTCCCTGCCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTTTGACGAAGAACCCGAGTTATTATTCAAGCGTATTCTACAAGTCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCCATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCAAAAAAGTTCATGGGTCAAATCTACATCCCCATAATTAATTGGTTTCTGATGATCATGTGCATAGTTGTGGTTTCCATCTTCCAAAGCACAACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATTGTTAGCACCACCTTGGTGACCCTTGTAATGGTTTTAATTTGGCAGACTAACTTATTTTTGGCATTTTGTTTCGCTCTTGTATTTGGTTCAGTGGAGTTAATTTACCTGTCTTCTGTCCTATCCAAAATCATTGAGGGTGGCTGGCTTCCACTTGCCTTTGCCACCTTTTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTATTGAAGTACCGAAGCGAAGTTAGAGAGAAGGTTTCAGTGGACTCAATGCTTGAGCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGAATAGGACTGCTATATAATGAGCTTGTCCAGGGCATTCCCTCCATTTTCGTGCAGTTCCTGCTGAACCTTCCAGCTCTTCACTCTACTATAGTCTTTGTCTGCATTAAATATGTCCCGGTCCCTGTGGTTCCTCAAGAGGAAAGATTTCTATTTCGACGAGTTTGCCCCAAAGATTACCACATATTCCGCTGTGTCGCCAGATATGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATTGAGAGTCTTGAGAAATTCTTGAGAAGGGAAGCTCTAGAAACAGCCTTGGAGGTGGAGGGCAACTTAAGTGATGACATGGACAGTGTCTCAGTGAATACAAGAGATTCTGATGTTCCTGTTGGTATCGCGGCTGAGGAGCTTAGTATTCCACTGATGCAGGATCAGAAATTGGAAGAAACAGGAATTTCTTCTGCCTCTCAGGAAGTTGCATCAGCATTGCCATCTAGTTACATGGCATCAGATGAAGATCCTGCTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAATGGAATCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAACTCTTTCTTCTTTAAGAAATTGATGATAAATTATTTCTATGCATTCCTCAGAAAGAACTGCAGAGGAGGTACAGCAAACATGAGAGTACCTCACACCAACATCATCCAAGTTGGGATGACATACATGGTCTGA 2523 0.4233 MKGDRIEESSTRLLGRSSSGGSSESRWVDGSEVDWDEVPMWSKHDDGREGYGSIRRRLAKKPKRVDSFDVEAMEIAGTHAHHSKDLSLWPTLALAFKTLGVVYGDMGTSPLYVFADVFSKVPIGSDADILGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVSLLPNRQQADEHISSFKLKLPTPELERALRIKETLERKSFLKNVLLVLVLLGASMVIGDGILTPAISVMSAISGLQDQIEEIGTGEVVGVSIVVLVALFSIQRFGTSKVGFMFAPILALWFFSLGSIGIYNILKYDITVLRAFNPAYIYYFFKNNGKDAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLTKNPSYYSSVFYKSVPESLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSKKFMGQIYIPIINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMIVSTTLVTLVMVLIWQTNLFLAFCFALVFGSVELIYLSSVLSKIIEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKVSVDSMLELGSNLGTVRVPGIGLLYNELVQGIPSIFVQFLLNLPALHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHIFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREALETALEVEGNLSDDMDSVSVNTRDSDVPVGIAAEELSIPLMQDQKLEETGISSASQEVASALPSSYMASDEDPALEYELSALREAMESGFTYLLGHGDVRAKKNSFFFKKLMINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01240 840 MobiDBLite consensus disorder prediction 12 26 - -
Pumo1g01240 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 83 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo1g01240 840 MobiDBLite consensus disorder prediction 1 30 - -
Pumo1g01240 840 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo1g01240 840 NCBIfam potassium uptake protein 94 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01240 Pumo-Chr1 20894072 20900259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01240 4 840 Inorganic Solute Cotransporters AT1G60160 74.435 0.0 1250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01240 K03549 - gmx:100814419 1518.83