Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01239 ATGGATCTGGAACGTGCGATTGCTCAAAACTCTGATAAGAGGAAAGAATCATGGAAAACGGTGCTGACTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGAGATTAGCACTTCACCACTCTACGTGTACAGGAACACATTTGCTGAAGATATTGGCCACTCAGAGACCAATGAAGAGATTTATGGTGTTTTGTCTTTGGTGTTCTGGACTCTCACATTGGTGCCTTTGGTGAAGTATGTGTTCATAGTGCTGAAAGCTGATGACAATGGTGAAGGTGGCACGTTTGCACTGTACTCTTTGCTGTGTCGCCATGCCAAAGTTGGCTTGTTGCCTAATTGCCAATTGGCAGATGAGGAGCTCTCAGAGTACAAGAAGCACAGCTGTGGTGTGGCACCAGAGAGAAGCCTTGCCTCCAGGCTCAAGTCCTTGTTGGAGAGGCACAAGGTCTTGCAGAGGATTTTGCTGGTTCTGGCTTTGTTAGGGACTTGCATGGTGATTGGTGTTGGAGTCCTTAAACCTGCCATTTCTGTTTTCTCAGCAGTGTCTGGCCTTGAGCTTTCAATGTCCAAGGAGCATCACAGATATGTAGAAGTTCCAGGTGCATGCATCATATTAATAGGCTTATTTGCCCTTCAACGTTATGGCACACACAGGGTTGGCTTCTTGTTTGCTCCCATAGTTTGTATATGGCTCTTCTGCATCAGTGCCATTGGTATATATAATATCTTTTACTGGAATCCTCATGTGTACCAAGCACTCTCTCCATATTATGTTTTCCAATTTTTAAGGAAGACTAGGAGAGGAGGTTGGATGGCCCTTTGTGGAATTTTGCTGTGCATAACAGGATCAGAAGCCATGTTTGCTGGTCTTGGGCACTTTTCTCAGCTATCAATCAAGATTGCTTTCACCTCTTTGGTTTATCCATCTTTAATCCTCGCGTATATGGGGCAAGCTGCTTATTTTTCTAGACATCATGATGTTGAGCAAGAGTATCACTTTGGCTTTTATGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTGGTGATAGCCATACTTGCTGCAGTTGTGGGAAGCCAATCCATCATCACAGGAACTTTCTCAATCATCAGGCAATGCTCTGCATTAAGTTGCTTCCCTAGAGTTAAAGTGGTTCACACTTCATCCAAAATCCATGGACAAGTATATATCCCTGAGATCAACTGGTTGCTGATGCTCTTGTGTTTGGCTGTAACTGTTGGTTTCAGAGACACAAAGCTTATGGGTAATGCATCAGGTTTGGCAGTTGTCTCAGTGATGCTGGTGACCTCATGTTTGATGTCACTGGTTATTGTAATCTGCTGGCACAAGAATGTTATGTTTGCAATTGGGTTTGTTCTCTTCTTTGGCAGCATTGAGGCTCTCTTCTTCTCAGCTTCTGTGATCAAGTTCTTTGAAGGAGCATGGGTGCCAGTTGCTTTGGCACTTGTGTTTCTGTCAGTCATGTGTGTGTGGCACTATGGCACTCTCAAAAAGTATGAATTTGATGTTCAAAACAAGGTTTCACTCAGCTGGTTACTCAGCCTTGGCCCTACCTTAGGCTTTGCAAGAGTACGTGGCATTGGCCTTGTGCACACTGAGCTAGTGTCAGGAATCCCTGCCATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAAATCCTTGTTTTCCTATGCATCAAGCATGTGCCAGTTCCACATGTTAGACCTGAGGAAAGGTTCCTAGTTGGTCGTGTAGGTCCAAAAGACTTCAGAGTCTACAGGTGCATAGTGAGGTATGGATACCATGATGTCCACCAAGATGATGATGAATTTGAGAAGGACCTTGTGTGCAGCATAGCAAAGTTCATACAAGCAGGAAGTGGTGGAAGCAACTCCTCAAATGATGAGCCTGAAAAGGGTGGTGGCAAAATGACAGTTGTTGGAACCTGTTCTACTAGCCACCCCATTTTGGTGAGTGAGAATGCTGAGGTTGATCATGTGGACTTAGCTGAGACATCAGAGTCACACAAAGTGATCAAACCAAAGAAAAAGGTTAGGTTTATTGTGCCTGAGAGTGCAAAGATTGACACTGGTGCAATGGAGGAGTTGAAGGAGCTGATGGAAGCTAGGGAAGTTGGGGTGGCCTACATTATAGGACAGTCCTACATGAGAGCCAAACCAGGATCCAGCATGCTGAAAAAATTGGTCATTAATTTTGGGTATGAATTCTTAAGGAAGAATAGTAGAGAACCCTCCTATGAACTTAGTGCTCCTCATGCATCCTCTTTGGAGGTTGGGATGATGTACCAAGTTTAA 2325 0.4443 MDLERAIAQNSDKRKESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYGVLSLVFWTLTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHAKVGLLPNCQLADEELSEYKKHSCGVAPERSLASRLKSLLERHKVLQRILLVLALLGTCMVIGVGVLKPAISVFSAVSGLELSMSKEHHRYVEVPGACIILIGLFALQRYGTHRVGFLFAPIVCIWLFCISAIGIYNIFYWNPHVYQALSPYYVFQFLRKTRRGGWMALCGILLCITGSEAMFAGLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYFSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTVGFRDTKLMGNASGLAVVSVMLVTSCLMSLVIVICWHKNVMFAIGFVLFFGSIEALFFSASVIKFFEGAWVPVALALVFLSVMCVWHYGTLKKYEFDVQNKVSLSWLLSLGPTLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPKDFRVYRCIVRYGYHDVHQDDDEFEKDLVCSIAKFIQAGSGGSNSSNDEPEKGGGKMTVVGTCSTSHPILVSENAEVDHVDLAETSESHKVIKPKKKVRFIVPESAKIDTGAMEELKELMEAREVGVAYIIGQSYMRAKPGSSMLKKLVINFGYEFLRKNSREPSYELSAPHASSLEVGMMYQV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01239 774 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo1g01239 774 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo1g01239 774 NCBIfam potassium uptake protein 24 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01239 Pumo-Chr1 20882467 20888169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01239 1 774 Inorganic Solute Cotransporters AT1G70300 72.066 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01239 K03549 - gmx:100784861 1467.6