Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01202 ATGCTATTCAGGTTGAACTATGACTCTGAGATTCAAGAAATCAAGGAATCTCTGCAGACCATTGAACTGGGGTGTAAGGAGCTTAGAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAACAGAATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTCAATTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGCACCGATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTTTGGAGGGAAAACGGGTTGCTCTTAACCGCAATGGAAGCCTGAGCAGTAGCAGCAGTAGGAGCAGCAGCAACAGCAATGGAAACTATGAGAACAACATTATTTCAAATGAACTGATAGAAAGGGAATATGTAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCGGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTATAACAATTTAGCTGGTTCAATCTCAGCCCTCTCAACCCGGTTAGTTGAAATTCGAGAACTTGTTTCCTTGTGTGGAAATGAAGGAGGACATTTTGTGAAAGAATTGGATCATTTTCTTGGAAATGCTGAGGAAGAGTTGAAATTAGTGAGGGAGAAGCAAACTAGTGTGTTGCAGCTTATCAAAACAACAACACAATACTATCAAGGAGGAGCTTCAAAAGAGACTTCAGAAGACAATCTTCAATTGTTTGTCATAGTGAAGGATTTCCTGGGAATGGTTGATCAAACTTGCATTGAGATTGCACGAGACATGCAGAAGAGGAAGCCTCCCAAGGCAATTTTTAGGTAG 825 0.4133 MLFRLNYDSEIQEIKESLQTIELGCKELRSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRLEGKRVALNRNGSLSSSSSRSSSNSNGNYENNIISNELIEREYVTLGLPIVGGISSELSNVKKAAQIDYNNLAGSISALSTRLVEIRELVSLCGNEGGHFVKELDHFLGNAEEELKLVREKQTSVLQLIKTTTQYYQGGASKETSEDNLQLFVIVKDFLGMVDQTCIEIARDMQKRKPPKAIFR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01202 274 Gene3D Formin, FH2 domain 1 271 IPR042201 -
Pumo1g01202 274 Pfam Formin Homology 2 Domain 1 252 IPR015425 -
Pumo1g01202 274 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 274 IPR015425 -
Pumo1g01202 274 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 267 - -
Pumo1g01202 274 Coils Coil 11 31 - -
Pumo1g01202 274 PANTHER FORMIN-RELATED 1 263 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo1g01202 274 SMART it6_source 1 267 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01202 Pumo-Chr1 20377402 20378226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01202 1 267 FH2 protein (formin) Gene Family AT1G70140 56.343 1.30e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01202 - - gmx:100783219 447.973