Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01183 ATGATGAATGCAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTAACTCTATTTGCAACTCTCTTCATGATGTGTTTCATTGGAGCCATAGGCAGTGCTATCTTCGTAAACAAAAAATATTTTTACTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAACCCCAAAAACAGATTTTTGGTTTTTCTCCTGACTATGTTTACCCTAATCACACTATACTCAACAATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTGACAAGAAATTTGATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGATTAGCGGAGCGCAATGGCATGAAGATTGAGGAAAATAGATCTCCCAATGCAGTGCATGAGAGAGGTTTTAATTTTGATGATGCTAGGATTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATGTCTGTAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTGCCCGAGGGTGAGGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCCGACGAGGCTGCTTTGGTTATTGCTGCAAAACACTTTGGTTTCTTTTTCTACAGACGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAAATGGGCAAAGTTCAAGACATGTCTTATGAAATTTTAAATGTGCTCGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTTTGTCGTTATCCTGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCTGATGGTAATAATAATATCAAGAAAGTCACCAGGGAGCATTTGGAACAATTTGGATCTGCTGGATTACGCACATTATGCCTAGCCTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTAAATGATCGTGAAAAGAAATTGGATGAGGTGGCAGAGCTTATTGAAAATGATCTCATTTTAATTGGTAGCACAGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAGAGACTCTTCAAAGAGCTGGCATTAAAATTTGGGTTCTCACAGGGGACAAGATTGAAACAGCGATAAACATAGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTTATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATCAAAGAAGAAGTGAAAAGAGAGCTGAAGAACTGCCTCGAGGAAGCACAGAGCTATTTTAACTCCTTATCTGGACCAAAATTAGCGCTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCACGCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTATGGTCAAGAAAGGTGCACGAAAAATAACACTTAGTATTGGTGATGGAGCCAACGATGTTAGCATGATTCAAGCTGCTCATGTTGGCGTTGGCATAAGTGGGATGGAGGGAATGCAAGCTGTGATGGCCAGCGATTTTGCCATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGATGGTCATATTTGCGAATATGCAAGGTTGTGATATACTTCTTTTACAAGAATCTCACTTTCACTCTTACTCAGTTTTGGTTTACGTTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTGCCTGTAATCATTGTTGGATTATTTGACAAGGATGTCAGTTCATCTCTATCCAAGAAGTATCCTGAACTATACATGGAAGGAATAAGAAATGTTTTCTTCAAATGGAAAGTTGTGGCCATATGGGCCTTCTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTACAACAAATTTAAGTGCTAAAAACTCAGCAGGCAAGGTATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACTTGTGTTGTAATAACCGTCAACTTGCGACTGCTTATGATTTGCAATTCGATCACTAGATGGCACTATATTAGTGTTGGCGGAAGTATATTAGCCTGGTTTCTTTTTATTTTTATATATTCAGGGATTACCACTCCTTATGATCGTCAGGAGAATATTTATTTTGTCATATATGTCCTGATGAGTACATTCTACTTCTACGTCATGATACTTCTAGTTCCTGTTGCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATAATTCAAGAAATGCATAGAGATGAGGTAGATAGCACTGGTAGGGCACAGTTGCTGGAGATAGGGAACCAGCTTACGCCAGCTGAGGCAAGGAGTTATGCTATATCTCAACTCCCACGCGAAATATCAAAGCACACAGGGTTTGCTTTTGATTCACCTGGGTACGAATCCTTTTTTGCCGCACAGCTCGGTGTATATGCCCCACCCAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAGATCACGGCCCAAGATTGGGCAGCATAAGTAG 2832 0.4011 MMNAMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEENRSPNAVHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGEESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDMSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKRELKNCLEEAQSYFNSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGARKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNSAGKVFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFLFIFIYSGITTPYDRQENIYFVIYVLMSTFYFYVMILLVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRDEVDSTGRAQLLEIGNQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMRSRPKIGQHK 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01183 943 FunFam Phospholipid-transporting ATPase IC 137 149 - -
Pumo1g01183 943 Pfam Cation transport ATPase (P-type) 235 331 - -
Pumo1g01183 943 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 849 IPR023298 -
Pumo1g01183 943 Coils Coil 486 506 - -
Pumo1g01183 943 Gene3D - 269 403 IPR023299 GO:0000166
Pumo1g01183 943 SFLD Haloacid Dehalogenase 122 622 - -
Pumo1g01183 943 NCBIfam HAD-IC family P-type ATPase 544 650 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo1g01183 943 FunFam Phospholipid-transporting ATPase 248 403 - -
Pumo1g01183 943 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 898 - -
Pumo1g01183 943 Gene3D - 404 611 IPR023214 -
Pumo1g01183 943 ProSitePatterns E1-E2 ATPases phosphorylation site. 142 148 IPR018303 -
Pumo1g01183 943 FunFam Phospholipid-transporting ATPase 404 611 - -
Pumo1g01183 943 Pfam Phospholipid-translocating P-type ATPase C-terminal 599 849 IPR032630 -
Pumo1g01183 943 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 146 418 IPR023299 GO:0000166
Pumo1g01183 943 SFLD p-type atpase 122 622 IPR044492 -
Pumo1g01183 943 NCBIfam phospholipid-translocating P-type ATPase 1 857 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo1g01183 943 PRINTS P-type cation-transporting ATPase superfamily signature 140 154 - -
Pumo1g01183 943 PRINTS P-type cation-transporting ATPase superfamily signature 571 590 - -
Pumo1g01183 943 SUPERFAMILY HAD-like 128 613 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01183 Pumo-Chr1 20120204 20128287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01183 1 939 Primary Pumps ATPases AT1G59820 79.468 0.0 1596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01183 K14802 - gmx:100815547 1845.09