Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01182 ATGAAGGGATGGGATGGGATTCAATCTTCGTTCTCTTCTCGATCGAGTTCCACGTTGGGCCAACAACAAGCTCCATCGCGAACGGTTCGACTCGGCCGAGTGCAGCCTCAGGCTCCGACTCACCGCACCATCTTCTGCAACGATCGCGAGGCCAATTTTCCCATCCGATTCAAGGGGAATTCTATATCAACTACCAAATATAACTTCTTGACCTTTTTGCCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACACCAATTAGTCCTGTGTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCCATAAACAATAATACGATAGATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAGATTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCTTGGCTAGCACTAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTACACCTTTACTGGAAATCTTATAACTCAAAAGCAAACACTGCCTCTCAGTCCAAATCAAATTTTGTTGCGGGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATATTTACAGGACACTGA 837 0.4205 MKGWDGIQSSFSSRSSSTLGQQQAPSRTVRLGRVQPQAPTHRTIFCNDREANFPIRFKGNSISTTKYNFLTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSINNNTIDVLQDQKWVSIPWKKLQVGDIVKIKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGH 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01182 278 Pfam Phospholipid-translocating ATPase N-terminal 44 108 IPR032631 -
Pumo1g01182 278 FunFam Phospholipid-transporting ATPase 118 278 - -
Pumo1g01182 278 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 278 - -
Pumo1g01182 278 SUPERFAMILY Calcium ATPase, transduction domain A 139 277 IPR008250 -
Pumo1g01182 278 Gene3D - 121 278 - -
Pumo1g01182 278 MobiDBLite consensus disorder prediction 1 30 - -
Pumo1g01182 278 MobiDBLite consensus disorder prediction 1 35 - -
Pumo1g01182 278 NCBIfam HAD-IC family P-type ATPase 108 206 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo1g01182 278 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 274 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01182 Pumo-Chr1 20109568 20119260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01182 10 278 Primary Pumps ATPases AT1G59820 81.784 4.49e-162 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01182 K14802 - gmx:100815547 527.324