Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01174 ATGAAGAGTGAAGTGAAGTTGTTGGGGGCATGGCCAAGTCCATTTGTGTTGAGGGCTCGCATAGCTCTAAACATCAAATCAGTGGAGTATGAATTCATTGAGGAAAGGTTGGGGTCCAAAAGCCAGCTTCTCCTTCAATCCAACCCCATTTACAAGAAAATCCCTGTTCTTATTCATAGGGACAAACCCCTTAGCGAGTCTTTGATCATTGTGCAGTATGTGGATGATGTCTGGTCCTCTGACTCCTCCATTCTCCCTTCTGATCCTTATGAACGCGCCATTGCTCGTTTCTGGGCTGTCTATATTGATGAAAAGTGGTACCCGACCATGAGATCCATTAGAGGAGCAGAAGGAAAGGATGAGAAGAAGAAATTGATAGAGGAGGTGAGAGAAGGATTGGCATTATTGGAGGATGTGTTTAAGAATAGCAGCAAAGGCTTCGCCTTTTATGGTGGGGACCAAATTGGGTTGTTGGACATTGCACTTGGTAGCTTCTTGGGGTGGCTGAGGGTCACTGAGATATCCAATGGGGTGAAGTTGCTTGACCAAAGCAACACACCTGAGTTGGTGAAATGGGCTGAAAGGTTTTGTGCACATGGTGCAGTCAAAGATGTTATGCCAGAGACAGGGAAGCTTGTTGAGTTTGCCAAGACGCTTAAACGCTAG 666 0.4595 MKSEVKLLGAWPSPFVLRARIALNIKSVEYEFIEERLGSKSQLLLQSNPIYKKIPVLIHRDKPLSESLIIVQYVDDVWSSDSSILPSDPYERAIARFWAVYIDEKWYPTMRSIRGAEGKDEKKKLIEEVREGLALLEDVFKNSSKGFAFYGGDQIGLLDIALGSFLGWLRVTEISNGVKLLDQSNTPELVKWAERFCAHGAVKDVMPETGKLVEFAKTLKR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01174 221 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Pumo1g01174 221 CDD GST_C_Tau 89 219 IPR045074 GO:0004364|GO:0006749
Pumo1g01174 221 FunFam Glutathione S-transferase GSTU6 1 85 - -
Pumo1g01174 221 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Pumo1g01174 221 CDD GST_N_Tau 5 78 - -
Pumo1g01174 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 213 IPR045073 -
Pumo1g01174 221 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Pumo1g01174 221 Gene3D - 85 221 - -
Pumo1g01174 221 Gene3D Glutaredoxin 1 84 - -
Pumo1g01174 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
Pumo1g01174 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Pumo1g01174 221 FunFam Glutathione S-transferase U9 85 221 - -
Pumo1g01174 221 Pfam Glutathione S-transferase, C-terminal domain 97 198 IPR004046 -
Pumo1g01174 221 SUPERFAMILY GST C-terminal domain-like 84 219 IPR036282 -
Pumo1g01174 221 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01174 Pumo-Chr1 20017518 20019068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01174 3 219 Glutathione S-transferase Gene Family AT1G10370 63.303 1.35e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01174 K00799 - gmx:121173931 360.918