Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g01168 | ATGGGTGCAGGGGACTACTACAAGATCCTCAAAGTGAACCGCAATGCCACGGATGAGGAACTCAAGAGGGCATATAAGAGGTTGGCCATGAAGTGGCACCCAGATAAGAACCATCAGCACCACCATGTTACCAAAGAAGAAGCTGAGGCAAAGTTCAAGCAGGTTTCGGAGGCTTATGATGTTCTCAGCGACCCCAAGAAGCGCCAGATCTATGATTTCTATGGCCACTATCCCCTTAACTCCATGAAGGTGAATGAGGAGAATGGTGATGGGGATGTTAGGCTCCCCAAGGGGGAGAAAAAAGTTGTTGGGGTGGTTGAGAGCAAATTGGTGTGCACCCTTGAGGAGCTTTACAAAGGTTGCAAAAAAAAGTTGAAGATCTCAAGGACTGTTCCTGGTGAATTCGGTAAGTTGAAAACTGTGGAAGAGGTCTTGAAAATTGACATCAAACCTGGTTGGAAGAAAGGCACAAAAATAACATTTCCTGGGAAAGGCAACCAAGAAGCAGAAGCTACTGCTCCTGATGATCTAATCTTTGTGGTGGATGAAAAACCACATGCTTTGTTCAAGAGAGATGGAAATGATTTGGTTGTGACACAGAAAATCTTACTTGTGGAGGCCCTAGTGGGAAAGACTCTCAACTTGACAACCTTGGATGGAAGAGAGCTCACAATTGAAGTCACAGATGTTGTGAAACCGAAATATGTGATGGTGGTCCCAAATGAAGGAATGCCAATCTCAAAGGAACCTGGCAAGAAAGGAAACTTGAGAATCAAGTTTGATGTTATGTTCCCATCAAGGCTTACCTCACAGCAGAAGTATGAGCTGAAAAGGATTTTGAGCAACAGTACTGATGACTAA | 861 | 0.4437 | MGAGDYYKILKVNRNATDEELKRAYKRLAMKWHPDKNHQHHHVTKEEAEAKFKQVSEAYDVLSDPKKRQIYDFYGHYPLNSMKVNEENGDGDVRLPKGEKKVVGVVESKLVCTLEELYKGCKKKLKISRTVPGEFGKLKTVEEVLKIDIKPGWKKGTKITFPGKGNQEAEATAPDDLIFVVDEKPHALFKRDGNDLVVTQKILLVEALVGKTLNLTTLDGRELTIEVTDVVKPKYVMVVPNEGMPISKEPGKKGNLRIKFDVMFPSRLTSQQKYELKRILSNSTDD | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g01168 | 286 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 189 | 273 | IPR008971 | GO:0006457|GO:0051082 | |
Pumo1g01168 | 286 | SUPERFAMILY | Chaperone J-domain | 4 | 81 | IPR036869 | - | |
Pumo1g01168 | 286 | Gene3D | DnaJ domain | 2 | 92 | IPR036869 | - | |
Pumo1g01168 | 286 | CDD | DnaJ | 5 | 64 | IPR001623 | - | |
Pumo1g01168 | 286 | FunFam | DnaJ-like subfamily B member 13 | 2 | 96 | - | - | |
Pumo1g01168 | 286 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 108 | 186 | IPR008971 | GO:0006457|GO:0051082 | |
Pumo1g01168 | 286 | Pfam | DnaJ C terminal domain | 106 | 265 | IPR002939 | - | |
Pumo1g01168 | 286 | ProSiteProfiles | dnaJ domain profile. | 5 | 75 | IPR001623 | - | |
Pumo1g01168 | 286 | Gene3D | - | 186 | 266 | - | - | |
Pumo1g01168 | 286 | CDD | DnaJ_C | 106 | 268 | - | - | |
Pumo1g01168 | 286 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 280 | - | - | |
Pumo1g01168 | 286 | FunFam | DNAJ heat shock family protein | 185 | 280 | - | - | |
Pumo1g01168 | 286 | Pfam | DnaJ domain | 5 | 72 | IPR001623 | - | |
Pumo1g01168 | 286 | Gene3D | - | 104 | 184 | - | - | |
Pumo1g01168 | 286 | SMART | dnaj_3 | 4 | 67 | IPR001623 | - | |
Pumo1g01168 | 286 | ProSitePatterns | Nt-dnaJ domain signature. | 52 | 71 | IPR018253 | - | |
Pumo1g01168 | 286 | PRINTS | DnaJ domain signature | 25 | 40 | IPR001623 | - | |
Pumo1g01168 | 286 | PRINTS | DnaJ domain signature | 47 | 67 | IPR001623 | - | |
Pumo1g01168 | 286 | PRINTS | DnaJ domain signature | 67 | 86 | IPR001623 | - | |
Pumo1g01168 | 286 | PRINTS | DnaJ domain signature | 7 | 25 | IPR001623 | - | |
Pumo1g01168 | 286 | FunFam | Dnaj homolog subfamily b member | 103 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g01168 | Pumo-Chr1 | 19914548 | 19917080 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g01168 | 6 | 74 | C2H2 Transcription Factor Family | AT1G74250 | 37.681 | 3.14e-11 | 61.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g01168 | K09510 | - | gmx:100786068 | 530.791 |