Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01155 ATGGGGTTGGGTGCTGAGAATGGAAAGGTGGTGGTGGAGTCTTTGGATGTGTGTAAATCAAAGGGGAGGAAGAAAAAGAAGAAAGAGGATGGGGAAGTTGAAGAGGAAGAAGAGACTGGGTGTTGGTTTAGGCTGAGGTTCATTGGGAGTTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTTAGTGGCACCAGCACTAATTATGCTGAAAGTAAATCAACTAATGATACAAGTAGAGATCAACCAACAGTCCCAGTAGTCTCTTCGACAACCACTAGTAATGCCGAAAGCAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGACTGCGAAAATTCACTTTCAATGATCTTAAGTTGGCAACAAGAAACTTTCGGCCTGAAAGTCTTCTGGGTGAAGGTGGGTTTGGTTGTGTGTTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACGGGGCTTACTGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAGGTAAATTATCTTGGTGATCTAGTTCATCCACACCTTGTTAAACTTATTGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTATATGAATTTATGCCTCGGGGAAGCCTGGAAAATCACTTGTTTAGGAGGTCACTGCCCCTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCAAAGGGTCTTGCTTTTCTTCACGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAAACTTCCAATATACTATTGGATGCAGACTACAATGCTAAGCTCTCAGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACAGGACATCTTACATCAAGAAGTGATGTGTATAGTTTCGGAGTGGTACTACTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCCAACGGTGAACACAACCTTGTGGAATGGGCTAGACCACATCTAGGAGAGCGAAGAAGGTTCTACAGGTTGATAGACCCGCGCTTGGAAGGTCACTTTTCCATAAAAGGAGCTCAGAAAGCCGCGCATCTGGCCGCTCACTGCCTTAGCAGAGATCCAAAAGCGCGACCCTTGATGAGCGAAGTTGTGGAAGCTTTAAAGCCTCTGCCAAACCTCAAGGACATGGCTAGTTCATCATATTATTTCCAGACAATGCAAGCTGACCGGTTTAGCGCGAGTCCAAATACCAGAAGTGGGAGAACACAAGGAGCATTGCTCACCAGAAATGGGCAACAGCAAAGGAGCCTATCAATTCCACATGGTACTCATGCATCTCCCTATCACCACCAGTTTCCCCAACCATCACCAAAATCCAATGGCAAGGCCAAGGCATAG 1467 0.4513 MGLGAENGKVVVESLDVCKSKGRKKKKKEDGEVEEEEETGCWFRLRFIGSCISSRSKVDSSVSGTSTNYAESKSTNDTSRDQPTVPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRSGRTQGALLTRNGQQQRSLSIPHGTHASPYHHQFPQPSPKSNGKAKA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01155 488 MobiDBLite consensus disorder prediction 435 488 - -
Pumo1g01155 488 Gene3D Phosphorylase Kinase; domain 1 89 215 - -
Pumo1g01155 488 Gene3D Transferase(Phosphotransferase) domain 1 216 432 - -
Pumo1g01155 488 FunFam Serine/threonine-protein kinase BIK1 97 215 - -
Pumo1g01155 488 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
Pumo1g01155 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Pumo1g01155 488 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01155 488 MobiDBLite consensus disorder prediction 56 106 - -
Pumo1g01155 488 PANTHER OS01G0588500 PROTEIN-RELATED 92 413 - -
Pumo1g01155 488 FunFam Probable serine/threonine-protein kinase PBL8 216 431 - -
Pumo1g01155 488 MobiDBLite consensus disorder prediction 435 464 - -
Pumo1g01155 488 MobiDBLite consensus disorder prediction 18 38 - -
Pumo1g01155 488 CDD STKc_IRAK 136 413 - -
Pumo1g01155 488 SUPERFAMILY Protein kinase-like (PK-like) 116 434 IPR011009 -
Pumo1g01155 488 Pfam Protein tyrosine and serine/threonine kinase 134 410 IPR001245 GO:0004672|GO:0006468
Pumo1g01155 488 MobiDBLite consensus disorder prediction 56 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01155 Pumo-Chr1 19351251 19355620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01155 77 410 Glycoside Hydrolase AT3G07070 53.846 3.93e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo1g01155 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01155 - - gmx:100807510 898.271