Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g01145 | ATGGCATGTAGTTCTTCACTAAAATTTGTGGACATCTCACACAACCTTCTGGTTGGAAAATTACCATCCTGCTTTGGTTCAGTGTCTTCAAAGGGCACAGTACTATATTCTGGGAATTGTTTGTCAACCAAAAAAAGGTTAAATGATCAACAACATCCATTTTCTTTTTGCAAGAGAGAGGGGGCTTTGGCTGTTAAGCCTCCAGCTAAAAAGCTGAAGAAGGAAACGGATTCGGGTACGAAACTAGGCCTAATGCTTGGAATAATTGGAGGGATTGTAATAATTGGAGGACTTCTGGTTCTACTCATTGTGTTCATCCTTAGGAAGTCCAAAGCAGAAAGATCACCTCATAAAATGGACAAATCTGTTGCTAATAAATATTCTACCAGTGTATCTCCTAGACCAAATGGAACAAGACATATTCCTCAGGCAATGAAGCAAGCTGCACTTGGACTGCCACCATACCGTATTTTCACATCGGAGGAAATTGAAGATGCAACTAACAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAGGGACAGTTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTTGTTAATTGTGTAAAAATAAGGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAATAGAGGTATTACCCAATTTGAGGCACAGACATATGGTGAGTGTTCTAGGACACTGTATCATTACTGAACAGGAGCATCCCCAAACAACAAGCACAGTCTTCATTGTATTTGAGTACATCTCAAATGTGTCATTGAGGGATCAACTTGCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTCCAGTTCTTACACACAGGAGTTGCTCCTGGCATATATGGCAACAATTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAACATTCCATTGCCATCCAAGAGTGCACTTAATGGACAAACTGCCACCAATCATATTGGAAGCACAAATAATGCAGAAAAGGAAGATATCTATCAACTGGGTGTTATTCTACTTGAAGTTATCACTGGCAAACAAATTACATCCTCGAGTGAAATAGAGGAGCTGAAGGACGAGCTGGAGAATGGTTCATCAGAGGCAACATCAGTAATTAGAAGCGCAATTGATCCTTCACTGAGGGGAACTTATGCATATGAATCAATGAAGACTGCAGTTCAGATTACCATCAACTGTCTCTCCAAGGTTTCTAGCCAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTACAGTATGCAATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA | 1374 | 0.409 | MACSSSLKFVDISHNLLVGKLPSCFGSVSSKGTVLYSGNCLSTKKRLNDQQHPFSFCKREGALAVKPPAKKLKKETDSGTKLGLMLGIIGGIVIIGGLLVLLIVFILRKSKAERSPHKMDKSVANKYSTSVSPRPNGTRHIPQAMKQAALGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVNCVKIRQKGLPHSIMQQIEVLPNLRHRHMVSVLGHCIITEQEHPQTTSTVFIVFEYISNVSLRDQLADGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYNIPLPSKSALNGQTATNHIGSTNNAEKEDIYQLGVILLEVITGKQITSSSEIEELKDELENGSSEATSVIRSAIDPSLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYAMQVQESWTSSGNLSTKL | 457 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g01145 | 457 | ProSiteProfiles | Protein kinase domain profile. | 170 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo1g01145 | 457 | SUPERFAMILY | Protein kinase-like (PK-like) | 151 | 438 | IPR011009 | - | |
Pumo1g01145 | 457 | Gene3D | Transferase(Phosphotransferase) domain 1 | 254 | 453 | - | - | |
Pumo1g01145 | 457 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 254 | 453 | - | - | |
Pumo1g01145 | 457 | Gene3D | Phosphorylase Kinase; domain 1 | 136 | 253 | - | - | |
Pumo1g01145 | 457 | MobiDBLite | consensus disorder prediction | 117 | 139 | - | - | |
Pumo1g01145 | 457 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At2g02780 | 143 | 243 | - | - | |
Pumo1g01145 | 457 | MobiDBLite | consensus disorder prediction | 122 | 137 | - | - | |
Pumo1g01145 | 457 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 87 | 446 | - | - | |
Pumo1g01145 | 457 | Pfam | Protein kinase domain | 176 | 434 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g01145 | Pumo-Chr1 | 19260125 | 19262451 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g01145 | 1 | 457 | Miscellaneous Gene Families | AT3G03770 | 41.542 | 8.57e-116 | 356 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Pumo1g01145 | Pkinase | 6.1e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g01145 | - | - | gmx:100789785 | 808.905 |