Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01143 ATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTACTTCTGGGGAAGAAATCATCATCAAAATCCAAGTCTTCTAGAGAGAAAGATATTTATAAACCTTCGAGTAACAAGGATGTTCTGGTGGTGTCTTCCGAGGCATCTATGTCTAATCCAACATCTGGGGCTAATGCTACTAAAGGAGTGCTGCTATCAGAAAAGGAAGTAGTTAGTATATCATCAAATGATGGGGTAAATCTTTCAACTGGACACAAACAGGACAATGCGCAATCTCTTGCTAATTTTGATTCTGGGGACCATCATGAGAAAAGCAAGCTAATAGAAACAGCTATAATAGTTCAGGCTGCTATTAGAGGCCATCAGGCACATGGGACATTTAAAACTCTCAAAGGTATCATACCACTGCAAGCTTATATTCGCGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTATATTGTGTGAAGTCAATAGTTAAATTTCAAGCATTGGCTCGTGGATACAAGGTTAGGCACTCTGATATTGGGCTTGCAGTCCAGAAAATTTTTAAGGATACTAAATTTCCAAATTCTATTGGAGTAATTGCATCCACACAGGAAGCGAAACTCTCAGATAATATCTTTGTTCACAAGCTTCTGGCTTCATCACCCTTTGCTGTTTCTCCAAATCTCAAACATAATGCTGGTGAACCTAACTTGATTAGGGAGTGGCTTGACCGTTGGACGAAATCACAATTTTGGGCACCTCTTCGAGAAGCACAGAAACCTGATTCAATGTCTGATAAGAAAAATGGAAGTTGTCAAACAGTTGAAACTAACAAGGGACAAGTCAAAAGAAATGCCAGGAAAGCACCTGCTGTGAGGGCTGGTGATGATGTAGTTTCAGATTCTAACAAACATAAACGGTATCCAGAAAAGGATTCAAACCTCCCATTGCATTCAGCTAAGGAACATCCACAAAAGGAACTTGAGAAAAGGAGTTCTAAAAAAATTCAAATTCAGAATGCTTCTGATAAATCTGAGGTTGCTAATGAGAAAAGAACACACATCACAAGAAAAGTGTCAGATCATGCAGTCAATGATGTTCTAGAGGAAGATGCTAGTGCTTCTTCAAAGAAAAAGATCGAAGATTTGGCAGTGTCAAAGTCAAAACAGAGTGATCTTGAGAAAAGTCTTGGACAGCAAGCAGAAGAGAATGGTAATAGTGAGTCATGTAATGATACTAATGCTCCCTTGCAGTGTAACTTGATGAATGGTAAAGATGGAGGACTCACAGAGGACTTGAATAGTGTAAATTCTAAGAATTTCCAGAGAAGAGCTTCTCTGCCTGCTAATTTTACAGATCATGAAAATCTGTTACATAGTAACACTCCAAGACGGCCTAGTTATATGGCTCCCACTGAATCTACAAGAGCTAAGCTAAGAGGACATGGACAAGGCTCGCCAAGGTCTGTTAGTGATTTGGCAGACGTAAGTAGCATAACTCGGCGGCTTTCACTTTCGTCTTCGCTTAATGGCAAGTTAGGTTCATTCTCTCCACGGTCAGATCGATTGGCTACCTTGAGTAACAAGATAAGGACTGACAGATCTCTATCATCTTCAAGGGATGGCACTGGTAAGAATTTAGGATTTTTCACCTTTTTCTCCTTACTTTCATGGATAAACATTTGGTTTTAA 1677 0.3977 MGRQSPGKWIRNLLLGKKSSSKSKSSREKDIYKPSSNKDVLVVSSEASMSNPTSGANATKGVLLSEKEVVSISSNDGVNLSTGHKQDNAQSLANFDSGDHHEKSKLIETAIIVQAAIRGHQAHGTFKTLKGIIPLQAYIRGQLVRRQAISALYCVKSIVKFQALARGYKVRHSDIGLAVQKIFKDTKFPNSIGVIASTQEAKLSDNIFVHKLLASSPFAVSPNLKHNAGEPNLIREWLDRWTKSQFWAPLREAQKPDSMSDKKNGSCQTVETNKGQVKRNARKAPAVRAGDDVVSDSNKHKRYPEKDSNLPLHSAKEHPQKELEKRSSKKIQIQNASDKSEVANEKRTHITRKVSDHAVNDVLEEDASASSKKKIEDLAVSKSKQSDLEKSLGQQAEENGNSESCNDTNAPLQCNLMNGKDGGLTEDLNSVNSKNFQRRASLPANFTDHENLLHSNTPRRPSYMAPTESTRAKLRGHGQGSPRSVSDLADVSSITRRLSLSSSLNGKLGSFSPRSDRLATLSNKIRTDRSLSSSRDGTGKNLGFFTFFSLLSWINIWF 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01143 558 MobiDBLite consensus disorder prediction 252 412 - -
Pumo1g01143 558 MobiDBLite consensus disorder prediction 260 275 - -
Pumo1g01143 558 MobiDBLite consensus disorder prediction 340 384 - -
Pumo1g01143 558 PANTHER IQ-DOMAIN 5-RELATED 1 502 - -
Pumo1g01143 558 MobiDBLite consensus disorder prediction 21 35 - -
Pumo1g01143 558 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Pumo1g01143 558 Pfam Protein of unknown function (DUF4005) 454 524 IPR025064 -
Pumo1g01143 558 Pfam IQ calmodulin-binding motif 156 171 IPR000048 GO:0005515
Pumo1g01143 558 Pfam IQ calmodulin-binding motif 135 147 IPR000048 GO:0005515
Pumo1g01143 558 MobiDBLite consensus disorder prediction 385 412 - -
Pumo1g01143 558 ProSiteProfiles IQ motif profile. 106 130 IPR000048 GO:0005515
Pumo1g01143 558 MobiDBLite consensus disorder prediction 293 332 - -
Pumo1g01143 558 SMART iq_5 105 127 IPR000048 GO:0005515
Pumo1g01143 558 SMART iq_5 153 175 IPR000048 GO:0005515
Pumo1g01143 558 SMART iq_5 128 149 IPR000048 GO:0005515
Pumo1g01143 558 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01143 Pumo-Chr1 19221480 19230173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01143 1 541 IQD Protein Family AT1G14380 33.277 1.23e-60 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01143 - - gmx:100800688 872.078