Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01128 ATGGAAGAAAAAGAAGGTCTTCATCATGAAAACGTGACTTTCAAGACCAATTTCCCACTACAGCTGTTGGAGAAAAAGCATGAGGAACCACCACCACCACTGAGTGCCACGGCCGAGAAGCCGAAGCGAGCATCGACGAAGGACAGACACACGAAGGTGGAGGGGCGGGGGCGGCGGATCCGGATGCCGGCGGCGTGCGCGGCGAGGGTGTTCCAGCTGACGCGCGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTGCTCCAGCAGGCCGAGCCCGCCGTCATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACCTCCCTCAACATCTCCCTCCGCAGCTCCGGCTCCACCCTCTCCTCCCCCTCCCACTACTTCCTCAACCGCCACAGCAATTTCTACAATAATCACAACAACAACAACAACTATCCCTTCGTCACAACAACACCCATATTTTCTTCTGGAAACTTTCCCCGCGGAAGATTCCAGAAGATTCTCTTTTCCTGA 522 0.5766 MEEKEGLHHENVTFKTNFPLQLLEKKHEEPPPPLSATAEKPKRASTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTLSSPSHYFLNRHSNFYNNHNNNNNYPFVTTTPIFSSGNFPRGRFQKILFS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01128 173 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 145 IPR005333 GO:0003700
Pumo1g01128 173 MobiDBLite consensus disorder prediction 1 55 - -
Pumo1g01128 173 MobiDBLite consensus disorder prediction 41 55 - -
Pumo1g01128 173 Pfam TCP family transcription factor 45 144 IPR017887 -
Pumo1g01128 173 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01128 Pumo-Chr1 18924554 18925075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01128 15 115 TCP Transcription Factor Family AT1G69690 75.000 3.39e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo1g01128 TCP 2.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01128 - - gmx:102664835 213.386