Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01127 ATGCACCTTAGGTCTGATAAGAATTTGAGCAAGATGGAACAAACAAAGAAGAATGGCTCCAAGACAGGCTCCAAGATGGGGGAAATGACACTGGGGATGCCAACATCTCTAATGAACCTCTATGACGTGTTAAGGGAAGCAATATCTAGCGGTCAGGTGCTTTCGCTTTACCAGGGCATTGGAACCAAGAATCTCCATTCTGTTGTTGCACAGTTTGTCTACTTCTATGGCTACAGCTACTTTAAAAAACTCTATATGGATAAAAGTGGTTCTAAATCCATTGGAGCCAAAGCAAACCTTGTAATTGCTTCTGTTGCCGGGGCCTGCACAGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGCCTTTGGAAAGTCTAAAGGGCTATTGAAGACTCTTGCAGAAGGCACAAGGAGTGATGCATTTGATGGCCTCAGCATTTCCTTGCTGTTGACCTCAAACCCTGCAATTCAGTATACACTGTTTGATCAGCTGAAACAAAGAGCACTGAGGAATACACTAGACAAAGATGATAAAGGATCATCTCCACCATCCCTTTCTGCATTTATGGCCTTTCTTCTAGGTGCTATTTCAAAGAGTGTTGCTACTTTCCTAACATATCCTGCTATCAGGTGCAAGGTCATGATTCAAGCTGCAGACATAGATGAACCAACCTCCAAACCAAAGGAAAAATCACAGAAAACTGTGTCTGAAATTCTCTATGCAATATGGAAAAAGGAGGGTATACTGGGATACTTCAAAGGGTTGCAAGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTTTTAATGATCAAGGAGAAGATCTCTACATCTTCTTGGTTGCTTATAGTAGCTCTTAGAAGGTATCTACTACTCACAAGGGATAGACTAAAAAACTTGAAATAG 930 0.4215 MHLRSDKNLSKMEQTKKNGSKTGSKMGEMTLGMPTSLMNLYDVLREAISSGQVLSLYQGIGTKNLHSVVAQFVYFYGYSYFKKLYMDKSGSKSIGAKANLVIASVAGACTAIVTQPLDTASSRMQTSAFGKSKGLLKTLAEGTRSDAFDGLSISLLLTSNPAIQYTLFDQLKQRALRNTLDKDDKGSSPPSLSAFMAFLLGAISKSVATFLTYPAIRCKVMIQAADIDEPTSKPKEKSQKTVSEILYAIWKKEGILGYFKGLQAQILKTVLSSALLLMIKEKISTSSWLLIVALRRYLLLTRDRLKNLK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01127 309 MobiDBLite consensus disorder prediction 1 29 - -
Pumo1g01127 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 94 174 IPR018108 -
Pumo1g01127 309 SUPERFAMILY Mitochondrial carrier 33 282 IPR023395 -
Pumo1g01127 309 Gene3D Mitochondrial carrier domain 9 287 IPR023395 -
Pumo1g01127 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 286 IPR018108 -
Pumo1g01127 309 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 37 307 IPR045900 GO:0005347|GO:0006635|GO:0015217
Pumo1g01127 309 Pfam Mitochondrial carrier protein 16 88 IPR018108 -
Pumo1g01127 309 Pfam Mitochondrial carrier protein 192 284 IPR018108 -
Pumo1g01127 309 Pfam Mitochondrial carrier protein 94 175 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01127 Pumo-Chr1 18901506 18904455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01127 37 281 Chloroplast and Mitochondria Gene Families AT1G25380 25.781 7.89e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01127 - - ccaj:109790003 428.713