Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01106 ATGCTTATACCAAAAACCAGCACCCTTTGTGGTGTTGAAGCGTGTGCTATAGTTTATGGCCCCGATGATACTCAGCCAGAAGTTTGGTCATCTGAATCGGGTGTCCAAAATGTGCTGGGAAAGTTCAAGAGTATGACTGAATGGAAGCAGCAGAGGAGAATGGTCAACCAGGAGAGTTTCATTGCACAAAGAAAGTTTCAGCCTAATAATACCATGACCACAGCTGATCTAAATGTTCTTTCATCGATGATTGAACAGAACCTGAAAGACGTTAATAGAAGGATGGAAATGTTGAATCTCAACCAGGGGTTTATGGACTTGCTTAATGGTAATGGGGATGAGACAATTGTAAAGCCTTCATTTGGAGATGCTAACCTCCATCCCTAA 387 0.4212 MLIPKTSTLCGVEACAIVYGPDDTQPEVWSSESGVQNVLGKFKSMTEWKQQRRMVNQESFIAQRKFQPNNTMTTADLNVLSSMIEQNLKDVNRRMEMLNLNQGFMDLLNGNGDETIVKPSFGDANLHP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01106 128 Coils Coil 81 101 - -
Pumo1g01106 128 Gene3D - 5 67 IPR036879 GO:0003677|GO:0046983
Pumo1g01106 128 SUPERFAMILY SRF-like 7 64 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01106 Pumo-Chr1 17866449 17867284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01106 3 98 Type I MADS-box Gene Family AT5G48670 40.800 4.25e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01106 - - gmx:100795996 139.043