Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01104 ATGCTTGCAAACAAACCTGTATTTCGGTGGATCCACAATCTTATGAAAGAAATGAACACCGAAATCGCATATATTTGCCTAGGCAATGTCCACGTTATCCCAGTTACTTGTCCCACCATTGCTTGTGAGTTTTTGATGAAAAAGTATGATGCTGATTTTGCATCAAGACCGCTAACCATGGCCACTGATATCATGTCTAGTGGTTATGTGACGATAGATATTGTACCCTTTGGGGAACAATGGAAGAAAATGAGGAGAATCTTCGTCAACGACTTGTTCTCCCCCCTCAGGCACCAATGGCTTCAACACAAAAGGAATGAAGAAGCTGATAACATCATGTTTTATGCCTTCAACAAATGCAACAACGTGAAAGATGGGAGCCATGTGAATGTCAGAGATGTTGCCCAACATTATTGTTGCAATGTGACGAGGAAACTGATTTTTAATACGAGGTACTTTGGAAAAGGTAGGGAGGATGGAGGGCCTGGGTTAGAGAAAGTAGAACATGTGAATATTATTTTCAAATTGCTTAAGCACGTTTATGACTTTTCTGTTTCTGATTATATCCCGTGCTTGAGGGTGTTTGATTTGGACGGCCATAAGAGCAAGGTAAAGAAAGGTATGAGGATGATGAAGAAGTATCATCATCCAATCATTGAAGAGAGAATCAAGCAATGGAACGATGGATCAAAGACCGTTGAAGAGGACTTGCTGGATGTTCTCATCTCACTCAAAGATGTCAATAATAATCCTACATTGACATTGAAGGAAATCAAGGCGCTCACTATGGAACTTATGCTTGGAGGAGTAGATAATCCGTCAAATGCAGTTGAATGTGCCCTTGCAGAAATGATAAATCAGCCAAATTTGCTTCAACGAGCCACTGAAGAAGTGGATAATGTTGTAGGTAAGGAGAGGCCTGTGTATGAGAAGTTTTTCGACTTCATCCTGTTGTGCCTTTTAATCCTCCACGTCTCAACGAATGATGCAGTGGTTTGCAATTATTTTATCCCAAAGGGTAGCCATGTACTACTAAGCAGACAAGGACTTGGACGAAACCCAAAAGTGTCGAATGAGCCCCACAAGTTCAAACCTGAACGCCACTTAATGAATGATGGATCTATGGTTGTTTTATCAGAGTCAAATTTAAAGTTCATATCATTTGGCACTGGAAGGAGAGGTTGTCCTGCAGTTATACTTGGCTCCACAATGACCGTGCTGTTATTGGCTAGGTTGCTTCATGCCTTCACTTGGAGTGTTCCTCCAAATGTATCAAGCATCAACCTTGCTAAGTCTAACACTGGTGGTATGCTTCTTAAGTCACTTGTACTTGTAGCAAAGCCAAGACTACCAGCAAAATTGTACTACATATAA 1374 0.4098 MLANKPVFRWIHNLMKEMNTEIAYICLGNVHVIPVTCPTIACEFLMKKYDADFASRPLTMATDIMSSGYVTIDIVPFGEQWKKMRRIFVNDLFSPLRHQWLQHKRNEEADNIMFYAFNKCNNVKDGSHVNVRDVAQHYCCNVTRKLIFNTRYFGKGREDGGPGLEKVEHVNIIFKLLKHVYDFSVSDYIPCLRVFDLDGHKSKVKKGMRMMKKYHHPIIEERIKQWNDGSKTVEEDLLDVLISLKDVNNNPTLTLKEIKALTMELMLGGVDNPSNAVECALAEMINQPNLLQRATEEVDNVVGKERPVYEKFFDFILLCLLILHVSTNDAVVCNYFIPKGSHVLLSRQGLGRNPKVSNEPHKFKPERHLMNDGSMVVLSESNLKFISFGTGRRGCPAVILGSTMTVLLLARLLHAFTWSVPPNVSSINLAKSNTGGMLLKSLVLVAKPRLPAKLYYI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01104 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Pumo1g01104 457 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 138 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 17 457 - -
Pumo1g01104 457 Gene3D Cytochrome P450 1 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 Pfam Cytochrome P450 16 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 Pfam Cytochrome P450 320 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01104 457 SUPERFAMILY Cytochrome P450 5 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01104 Pumo-Chr1 17843025 17846472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01104 1 455 Cytochrome P450 AT4G39950 49.469 1.81e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01104 - K14984 gmx:100787378 744.191