Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01096 ATGGCTTGTTTCTTTAAAGGTTACAATTTGAAAGATGTCATAAATTTATTAGTCCAAGGTCGTGGTTTCTCACCAGAAAATGATATTCGAGGGTTGATTGATAAATCTCTCATAAAGATCGACCAATATGGTGTTGTGGGAATGCATAACATAGTAGAGGACATGGGCAGAGAAATTGTTACGCAGGAGTCACCATCAGAACCTGGAAAACGCAGTAGATTATGGCGTTGTGAGGATATTGTTGATGTTTTAGAAAATGACAAGGGAACTGGTACAATTGAAGCAATCATGCTCCAACACTTGCCAATGAACAAGGAAATCCGGTGGAATGGAAGTGAGCTCAAGAAGATGACAAACCTAAAAATACTAAATATTAAAAATGCTCATTTTTCTAGAGGCCCTGAACATCTCCCAAAAAGTTTGAGAGTGCTAAAGTGGTGGGGATATCCTTCACCGTCTCTGCCTCTTGAATTTGATCCAAGTAGACTTGTTGTGTTAGACTTGTCTATGAGTCGCAATCTATTGGACATACAGCTCAAACTCATGAAATTCGAGTCTTTGAGTGAAATGGTTTTAAGGGGTTGCCAATTCATAGAAAAGGTGCCTGACATGTCTGGAGCCAAAAAATTAACAATGCTGTGTCTTGATAACTGCAAGAATTTAGTAGAAGTTCATGATTCCGTCGGGCTTCTTGACAAACTTAAATGGTTCACTGCTATTGGATGCACCAATCTAAGGATTCTTCCTCACAACTTCAAGTTAACATCACTTGAATATCTGTCTCTCAAAAAATGCTCAAGTCTCCAGTGTTTGCCAAATATATTAGAAGAAATGAAACATATAAAAACTCTTGATCTGTGTCGAACTGCTATTGAAGAGTTGCCATTTTCGTTTAAGAAATTGACTGGCCTTCAATATCTACTGCTGGACAAGTGCAAGAAGCTTAATCACATTCCAATAAGTATTTTGATGTTACCAAAACTTAAGAGATTGACAGCAGTAAAGTGTGGACGGTATGGAAATTTGATCCTTGGTAAAGGAAAAGAACAAGTAAGATTGGGTTCATCTGAGATTTTGAGAGATGTTAGATCAAACTACAATGATTTGACACCTGTCAGCTTCCCCAATATAGAATTCTTAGTCCTAACTGGCAGTTGTTTCAAAGTGCTTCCTGAATGCATCAGCCAATGTCGCCTTCTGAAGAATCTAGTTTTGGACAATTGCAAGGAGCTTCGAGAAATCAGAGGGGTTCCCCCAAAGATAAAATATCTCTCGGCAATAAACTGCAAATCATTGACCCGTGAGTCTCAAAGCATGTTGTTGAATCAGAGATTACATGAGGGTGGGGACACAGATTTTTCCCTTCCAGGAACAAGGATACCAGAATGGTTCGACCATTGTACTACGGGACCATCCCTGTCTTTCTGGTTTCGTAACAAGTTTCCGAGGATGGCTATAGCTGTTATTGGAGATTTGGACAAGCAGGGAAGCTTTCCCATGTCAAGATTCCACTTGCTCATCAATGGCATTCAAAGGCTGCAATGCGATTTCACTGTGCAATCAAAACTAATCACCTTAAAAAATTGCGGAGTAATCTCAACTCATGGACAAGATGAAGGCCATCAGGATCAAGAAGAGGAAGAGAATAGAAAGTTAGAGATGATTGTATCTTCCTATGAAGTGTGA 1686 0.3926 MACFFKGYNLKDVINLLVQGRGFSPENDIRGLIDKSLIKIDQYGVVGMHNIVEDMGREIVTQESPSEPGKRSRLWRCEDIVDVLENDKGTGTIEAIMLQHLPMNKEIRWNGSELKKMTNLKILNIKNAHFSRGPEHLPKSLRVLKWWGYPSPSLPLEFDPSRLVVLDLSMSRNLLDIQLKLMKFESLSEMVLRGCQFIEKVPDMSGAKKLTMLCLDNCKNLVEVHDSVGLLDKLKWFTAIGCTNLRILPHNFKLTSLEYLSLKKCSSLQCLPNILEEMKHIKTLDLCRTAIEELPFSFKKLTGLQYLLLDKCKKLNHIPISILMLPKLKRLTAVKCGRYGNLILGKGKEQVRLGSSEILRDVRSNYNDLTPVSFPNIEFLVLTGSCFKVLPECISQCRLLKNLVLDNCKELREIRGVPPKIKYLSAINCKSLTRESQSMLLNQRLHEGGDTDFSLPGTRIPEWFDHCTTGPSLSFWFRNKFPRMAIAVIGDLDKQGSFPMSRFHLLINGIQRLQCDFTVQSKLITLKNCGVISTHGQDEGHQDQEEEENRKLEMIVSSYEV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01096 561 SUPERFAMILY "Winged helix" DNA-binding domain 2 85 IPR036390 -
Pumo1g01096 561 Coils Coil 542 561 - -
Pumo1g01096 561 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 346 IPR044974 GO:0006952
Pumo1g01096 561 Gene3D Ribonuclease Inhibitor 253 447 IPR032675 -
Pumo1g01096 561 Gene3D Ribonuclease Inhibitor 93 252 IPR032675 -
Pumo1g01096 561 SUPERFAMILY L domain-like 62 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01096 Pumo-Chr1 17502713 17506703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01096 1 336 WRKY Transcription Factor Family AT4G12020 36.752 3.64e-48 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01096 - - gmx:100810811 871.307