Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01087 ATGGTTCATGGAAGATTGAAAGAAACATTGACCGGGAAGAGATTTCTTCTTGTTTTAGATGACGTTTGGAACGAAAAACGTGAGAAATGGGAAGCTGTGCAAACTTCTCTTAATTATGGGGCCCAGGGAAGTAGAATTCTTGTCACAACACGCAGTAAAAAGGTTGCTTCTACCATGCGGTCAAACAAAGTACATCACCTAGAGAAATTACAAGAAGATCATTGCTGGCAAGTATTTGGTAAACATGCGTTCCATGATGATAATCCTCAATTGAATGCAGAGCTAAAGGAGATTGGTATGCAGATAGTTGAAAAGTGTAAAGGAATGCCTCTAGCATTGAAAACAATTGGAAGTCTTCTACACACAAAGTCATCTATTTCAGAATGGGAAAGTGTATTGACAAGCAAGATATGGGACTTATCGAAAGAAGATTGTGAAATTATGCCTGCTTTATTTTTGAGCTATCACCACCTTCCTACTCATCTTAAGAGATGTTTTGCTTTTTGTGCCTTATTCCCTAAAGATTATCTGTTTGTCAAGGAGGGTTTAATTCAATTGTGGATGGCTGAAAATTTTCTACAATGCCCTCAACAGAGTAAGAGTCCAGTAGAAGTTGGTGAATAA 624 0.3782 MVHGRLKETLTGKRFLLVLDDVWNEKREKWEAVQTSLNYGAQGSRILVTTRSKKVASTMRSNKVHHLEKLQEDHCWQVFGKHAFHDDNPQLNAELKEIGMQIVEKCKGMPLALKTIGSLLHTKSSISEWESVLTSKIWDLSKEDCEIMPALFLSYHHLPTHLKRCFAFCALFPKDYLFVKEGLIQLWMAENFLQCPQQSKSPVEVGE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01087 207 Gene3D - 1 68 IPR027417 -
Pumo1g01087 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 169 IPR027417 -
Pumo1g01087 207 PANTHER DISEASE RESISTANCE PROTEIN RP 6 196 IPR044974 GO:0006952
Pumo1g01087 207 Pfam NB-ARC domain 5 155 IPR002182 GO:0043531
Pumo1g01087 207 PRINTS Disease resistance protein signature 106 120 - -
Pumo1g01087 207 PRINTS Disease resistance protein signature 9 23 - -
Pumo1g01087 207 Gene3D - 69 159 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01087 Pumo-Chr1 17411041 17411664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01087 6 172 WRKY Transcription Factor Family AT5G45050 30.233 5.67e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01087 - - gmx:100777280 351.288