Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01079 ATGAATCGCAGAAGACTGATAATATGGATGGGTAGCAGAGTTTGTTGGTGTTGGAGTCGTACACTGTCAAGGCAAATCATGGATGTATGGGGAGCTGAAACAATGGGGTGGTTTGGAAGGCAGCAAATGCTTGTGGACATGGCAGGATTAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCCAAAATGCAGACTACCAAAATCAATCCAGGAAATATAGCAATGGTGAAAGTGGTGGAGTCCATTGCAAATGAAAAACAAGCAAAGAGAGGACAAACTTTGCTTTGTGGATTAATTGGTTTACCCCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAAAACCTGCAGGTTGTTCTCAAGAAGCAGTTGATCAGAAGAAAAATGGTTAAAAGTGTCAAGGAATGCATAAGACAGAAAGCTAGCAAGTATGTAATCTATGGGAAGATGCAAGCAGTGTTCATAGAAATGGATAACTGTATAGATCATATACTCTCAAAGCCGTTCAAGCCTCACCATCTTAGGGAACTAGATGCTGGCTGA 555 0.4162 MNRRRLIIWMGSRVCWCWSRTLSRQIMDVWGAETMGWFGRQQMLVDMAGLENIEQAGQTGFEAKMQTTKINPGNIAMVKVVESIANEKQAKRGQTLLCGLIGLPPSNGVLPQSPMHTKNLQVVLKKQLIRRKMVKSVKECIRQKASKYVIYGKMQAVFIEMDNCIDHILSKPFKPHHLRELDAG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01079 184 PANTHER ANION EXCHANGE PROTEIN 95 139 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01079 Pumo-Chr1 17266690 17269640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01079 95 162 Antiporters AT5G25430 72.059 1.53e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01079 K24194 - gmx:100811184 122.094