Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01078 ATGGCGTTTACGGTTAGATGGAAACATAGAGAATCACCTTGTCCGTTTTGGTTCGATGAATTTGGTTTGATGGGTAAACCATTGACTCCCAGTGGCGAAGGCTTTCGGAACAACGTGTCCTCTCTTATCAAAGATCATGCAAATGCGTGTGGTGAAGATTATAAGATTTCTGGCAAATGCGTGTGGTGCATTGTCCTTCTTGAAAAGGGCACAAGGAGAACGTCCTGTCCCTTGTACATAATAAAAGATAAATGCTCATCTTGCAATTACTGTGAATCCGTTGGTTGGAATCTTGAAAACACTTCAGAAATAATGTATCATCTCATCATTCCCAGAGATGATAGATGGGAAGCATGCTTGAAAGAAGATGCCTTGACTATTAATAACAAGCATTTATTGCATGGTCTGATTCATGCCAACGGCTATGGCCATTTACTCTGTATCAATGGCATCCAAGGAGGATCTAAAGTAGTCTTCCGCGGACGAGAAATCATGAATCTATGGGATAGGCTCTGTACAAATCTTGAAACCAGGAAAGTATCATTGTATGATGTTGCTATTAAAAGGTCCATGAAGTTAAGATTGCTTCACCTTATTGCCTTTGGACATACGTGGTTCGGAAAGTGGGGATATGAAGAAGCAGATGAAGAAACAGACTATACATACAGTTATGAAGTGGCAAAGCTTCAGTCATTAGAATTGGATGAGATAAAAGAAGATTCTGAGGGCATGCATTTTGAAGAGAAAAGGAAGCTGTTCAGGATGTTTAACTATTACAGGGACTTGTGTGAAACCCATCTCATCACACTGAAGGATCTTCTAAATTTCATGCTGATAATTAAAATATCCCAGTCCCAGTCATCTGACTCTGGGAAGAAGAAATCGGTCCTCGATGACTTAAAGTTGATCAATCACTTACTGGACACCCTCATCAACGTGGTTGTTGATGATCACGTTATACGTTATGTCCGTAATCCAGCATCTAGAAGGATGGAATACACAGTTATTGAACTGAGCCAGCAGGAACTAGACTCAATGTGGATACCGGGTGATAACATTTACTCCGATTTGCTTTTTCTCTACAAAAAAGTCTTGCTGAGTCGCGATGATTCAAAAGCTGAAGTTAAGTTGACAGCCAAGAAAATTCTAAAGAGAAAGCGATTTGTGAAGAATTATGAAACCAACGTAGCAGCAATAACTCAGGATTAG 1209 0.3995 MAFTVRWKHRESPCPFWFDEFGLMGKPLTPSGEGFRNNVSSLIKDHANACGEDYKISGKCVWCIVLLEKGTRRTSCPLYIIKDKCSSCNYCESVGWNLENTSEIMYHLIIPRDDRWEACLKEDALTINNKHLLHGLIHANGYGHLLCINGIQGGSKVVFRGREIMNLWDRLCTNLETRKVSLYDVAIKRSMKLRLLHLIAFGHTWFGKWGYEEADEETDYTYSYEVAKLQSLELDEIKEDSEGMHFEEKRKLFRMFNYYRDLCETHLITLKDLLNFMLIIKISQSQSSDSGKKKSVLDDLKLINHLLDTLINVVVDDHVIRYVRNPASRRMEYTVIELSQQELDSMWIPGDNIYSDLLFLYKKVLLSRDDSKAEVKLTAKKILKRKRFVKNYETNVAAITQD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01078 402 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 296 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01078 Pumo-Chr1 17262683 17264243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01078 16 392 PHD Transcription Factor Family AT5G22260 26.105 1.50e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01078 K26271 - pvy:116117976 237.654