Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01041 ATGTTACCCAAAATGGGTGCTGAAAATGGAGATTATTTTTCCGTGAGTGTGACCAATGAAGAGGTGGTGGCAGCAGTGGTACCAATGCAAGAACATTGGCTTCCACTCTCTAACCTTGACCTACTTCTACCTCCACTTGATGTAGGAGTCTTCTTTTGCTACAAGAACCCCAACAACATTAGTGGCACTAACAAAATAACCTTTGGATCCATGGTGGGCTCTCTAAAATACGCCCTAGCACAAGCTTTAATCTCTTATTATGCATTTGCAGGTGAAGTGGTGTCCAACAACATGGGTGAACCCGAGGTGCTTTGTAATAATCGTGGGGTTGATTTTGTTGAAGCTGAGGCAGATGTTGAGCTACAATGCCTCAACTTTTACAAACCAGATGATACCATTGAAGGCAAGTTTGTTCCAAAGAAGAAAAATGGTGTGCTTGCTGTCCAGGCAACGTCACTCAAGTGCGGTGGAATAGTAGTAGCATGCACATTTGATCACCGCATAGCAGATGCCTATTCAGCCAACATGTTCCTCGTATCATGGGCCGAGATGGCCCAGCCCACCAAGCCCACAACCACTACCACCCCATGTTTTCGTCGTTCCCTCCTTAGTCCTCGTCGCCCGGGTTCTATTCCTCATTCCCTTCATCACATGTACATCCCTGTCTCCAAGCTCACTCCTCCTTGTGCCACTACCACCCCTCTCCTTAGCCGCATATACTATGTAACCACAAAGCAACTTCACAACATGCAATCCCTTGTTGTCTTGACAAATGTTAACAACACAAAGCGTACAAAACTTGAGTGTTTCTCTGCATTCTTGTGGAAGATAGTTGCTTGTGCAGCTTCAAGAGGCGACAAGAAGGGTAAAAAGATCATGGCTAAAATGGGCATTGTGGTTGATGGAAGGAAAAGACTGTGCAACGGTGACAAAGAGAAGGAGGCATTGATGGGGTGTTACTTTGGCAACGTGCTTTCCATACCCTTTGGAGGGAAAGAAGTGGAAGAGTTGATGGAGAAGCCATTAGGGTTTGTGGCTGATGCGGTTCACGAGTTCCTGGTGGAGGCGGTAATAGAGGAGCACTTATTAGGGCTAATCGATTGGGTGGAGGCTCATCGGCCGGTCCCTGGAGTGGCTAAAATTTATTGTAGTAACGCTGAGGAGGGACCGGCCTTTGTGGTGTCCTCCGGGCAGAGATTCCCAGAGGACAAGGTGGATTTTGGGTGGGGGAAGGTTGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTCATGCCAATGTCAAGCCCTCTACGGAATGGTGATTGGGTTGTGTACATGCATCTTGCAAAGGAGCAGTTGGAGGTCATAGAGTCTGAGGCTAGTGATGTCTTTAGACCCATAACTTGGGATTACCTTAACCAGTGA 1419 0.4729 MLPKMGAENGDYFSVSVTNEEVVAAVVPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPNNISGTNKITFGSMVGSLKYALAQALISYYAFAGEVVSNNMGEPEVLCNNRGVDFVEAEADVELQCLNFYKPDDTIEGKFVPKKKNGVLAVQATSLKCGGIVVACTFDHRIADAYSANMFLVSWAEMAQPTKPTTTTTPCFRRSLLSPRRPGSIPHSLHHMYIPVSKLTPPCATTTPLLSRIYYVTTKQLHNMQSLVVLTNVNNTKRTKLECFSAFLWKIVACAASRGDKKGKKIMAKMGIVVDGRKRLCNGDKEKEALMGCYFGNVLSIPFGGKEVEELMEKPLGFVADAVHEFLVEAVIEEHLLGLIDWVEAHRPVPGVAKIYCSNAEEGPAFVVSSGQRFPEDKVDFGWGKVVFASYHFPWGGEAGYVMPMSSPLRNGDWVVYMHLAKEQLEVIESEASDVFRPITWDYLNQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01041 472 Pfam Transferase family 14 460 - -
Pumo1g01041 472 Gene3D - 223 457 IPR023213 -
Pumo1g01041 472 Gene3D - 14 221 IPR023213 -
Pumo1g01041 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01041 Pumo-Chr1 16482750 16485652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01041 24 455 Monolignol Biosynthesis Gene Families AT5G48930 26.444 3.24e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01041 - - gmx:100777149 758.444