Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00993 ATGGTGCCTCATTTTCTAATTACAAGGTTAACCGCATCCTTCACACACTACAAAACCACCCAAATCCAATTGGATTCTCTGCTGCAACACAAACAGAGTGCTTTTCTTTTTTCCTTTAATTCGTTCACTTCTGGTAGAGACAATCATAAAGGTGTCACCTTTAAAGTGTCATACCTTATAAACTCATGTGGGTTGTCCCCAGAATTGGCTTACAAACTCTCCAACAGGGTCAATTTTAAAACCCCAGATGGCCCAAATGCTGTTCTTGACACGCTCAAGAACTATGGATTCTCCAAAACTCAGGTTGCAAAACTTGTGGAGAAGCATCCCAGGGTGCTTGCTGCAAATGCAGAGAGCACCCTTTTGCCTAAACTCAAGCTCTTCCACGCTATTGGGGTTTCCAACACTGACATGCCTAAGATCATACTCAAGATCTTGCGGAGGAGCCTGGCAAAATGCCTTGTCCCACGATGCGAGATGATCATCGGGAAGTTGTTATTGTTTTGA 507 0.4359 MVPHFLITRLTASFTHYKTTQIQLDSLLQHKQSAFLFSFNSFTSGRDNHKGVTFKVSYLINSCGLSPELAYKLSNRVNFKTPDGPNAVLDTLKNYGFSKTQVAKLVEKHPRVLAANAESTLLPKLKLFHAIGVSNTDMPKIILKILRRSLAKCLVPRCEMIIGKLLLF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00993 168 PANTHER CGI-12 PROTEIN-RELATED 55 160 IPR003690 GO:0003690|GO:0006355
Pumo1g00993 168 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Pumo1g00993 168 Pfam mTERF 89 144 IPR003690 GO:0003690|GO:0006355
Pumo1g00993 168 Gene3D Transcription termination factor 3, mitochondrial 67 166 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00993 Pumo-Chr1 15742954 15743460 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo1g00993 mTERF 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00993 K15032 - gmx:100813396 265.774