Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00989 ATGGTGTCCTCCTTGGTGCCCCTATGGCTTGAAAATTCGGTCATGAACCAGGTGCTTGTTAAATCATGTTTTGGAGTTGCAAGGAAAATTAAAAGCCATGGGTTTCAATGGGGTGATATTTCATCCAAACCCTTGCATCAACCTTCCCCATTCCCCAACATTGTCAAGTGTGATTTGGAGGGTAGAGGGTCACAAACCCTAGCTTGTGACTTTCACAAAGTCCTCTTGAGGACTCATTCCTTCTTTCCCTACTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATCTTCAGGGCATTCCTCTTGCTTTGTTCATGCCCTATACTGTGGATCTTAAACTATGAAATGAAGCTCAGAGTCATGATCTTCATCTCCTTTTGTGGCCTCAGAATGAAGGACATGGAAAACACTTCAAGGGCAGTTTTGCCAAAGTTCTACTTGGAGAACCTCAACCTTGAGGCCTATGAGGTAGTGGCTTCTGTAGGGTCCAGAGTTTTCTTCACCACTATGCCTAGAGTGATGGTAGAAGGGTTTCTCAAGGAGTATTTGAATGCTGATGCTGTTATAGGTACAGAGTTGCACACTGCTGGCTGTTACTTCACTGGCTTGCTCTCTAAGTCTGGTTTGCTTGTGAAGCATAGTGCCCTCATGGATTATTTTGGAGATACAAGGCCTGATCTTGGGATTGGTAACACTAGTCTTCATGATCAACTTTTTATTTCTCTTTCCAAGGAGGCTTATGTGGTGATCAATGAAGAGGGCAAAGCCATGCCAAGAAAAAAATATCCAAAGCCCTTGATATTTCATGATGGAAGACTAGCATTTTTGCCTACACCTTCAGCAACCCTATGCATGTTCATGTGGCTTCCGATTGGATTTCTGATGGCCATATACAGAATCTTTCTGGGGGTTTTCCTTTGTTGCAAGTTCACACTGGCACTAGGGTTAGGGATTGGCATAGATCTGAATTTCATTGACAAGAACCAACAAAGATCAGAGTCAAAAAAAGGGGTGCTCTATGTGTGTAGCCACAGGACTCTCTTGGATCCAATTTTTCTTAGCACATGTTTGGGGAGGCGTTTGACTGCAGTCACATACAGCCTAAGCAAGGTGTCTGAGTTGATAGCTCCAATTAGGACCATGAGGCTCACAAGGGACAGACAACAAGATGGAGAAACTATGAAAAGGTTGCTATCTGAAGGGGACTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCATATTTGCTAAGGTTCAGTTCCTTGTTTGCAGAACTGGCTGATGAGATTGTGCCTGTGGCTATGAATGCTCAAGTGACCATGTTCTATGGGACCACAGCCAGTGGACTGAAGGTCTTGGACCCTATTTTCTTTTTCATGAATCCTTGGCCAAGGTATGACATTCAAGTCCTTGGAAAGGTTCCTAGAGAACTCACTTGTGCTGGTGGAAGGTCTAGCCATGAAGTGGCAAATTACATACAGAGACAGTTGGCTGATGCTTTAGGGTTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGGAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTATGCTAA 1602 0.4426 MVSSLVPLWLENSVMNQVLVKSCFGVARKIKSHGFQWGDISSKPLHQPSPFPNIVKCDLEGRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPILWILNYEMKLRVMIFISFCGLRMKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIGTELHTAGCYFTGLLSKSGLLVKHSALMDYFGDTRPDLGIGNTSLHDQLFISLSKEAYVVINEEGKAMPRKKYPKPLIFHDGRLAFLPTPSATLCMFMWLPIGFLMAIYRIFLGVFLCCKFTLALGLGIGIDLNFIDKNQQRSESKKGVLYVCSHRTLLDPIFLSTCLGRRLTAVTYSLSKVSELIAPIRTMRLTRDRQQDGETMKRLLSEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMNAQVTMFYGTTASGLKVLDPIFFFMNPWPRYDIQVLGKVPRELTCAGGRSSHEVANYIQRQLADALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRLC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00989 533 CDD LPLAT 325 498 - -
Pumo1g00989 533 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 528 - -
Pumo1g00989 533 SMART plsc_2 337 438 IPR002123 GO:0016746
Pumo1g00989 533 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 260 525 - -
Pumo1g00989 533 Pfam Acyltransferase 326 430 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00989 Pumo-Chr1 15688294 15690713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00989 10 525 Acyl Lipid Metabolism Gene Families AT1G06520 54.688 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00989 K13508 - gmx:100802208 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00989 1 15688294 15690713 Pumo9g01866 9 47816153 47818650 PCT
Pumo9g01958 9 49094767 49096054 Pumo1g00989 1 15688294 15690713 PCT