Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00985 ATGCAGCAGGATCACAGGAAAAAGAGTTCAGCAGAGATGGATTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCACACCGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATATATCTGATGCTGCTCGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTAAGACATCCTGACATTGTTGAAATAAAACACATTATGCTGCCTCCATCAAGGAAGGACTTTAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACACTATCAGTTTTTTCTTTATCAGTTACTTCGAGCACTGAAGTACATTCACACTGCAAATGTCTATCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCGAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATATTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTCCATCAATTGGATCTGATGACAGATCTGCTTGGGACACCTTCACTGGATACTATATCACGGGTACGTAATGAGAAGGCACGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCATTTGCTCAAAAATTTCCCAATGCAGACCCTTTAGCACTAAGGCTACTGGAAAGGTTGTTGGCTTTTGATCCAAAAGACCGACCTACTGCTGAAGAGGCTTTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATCACAAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACGAAGGAAGAAATTCGAGAGCTGATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGGAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACAGTACACCCAAAAGAGCAAACAAATATTGCTTCTAGCAAAAACCGGCCAACAGCCGAGGAATATAACAAGATTCCCAGAGATACAGAAATTCCAGTGCCAAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCCGGTAAAGTTGTCGGGCCCGTTGTTCCATACGAGTACGGTAACATTGTCAAGGATTCTTATGATCCTAGGTCATTTATCAGAGGTTCTGTGCTTCCTACACAACCTGTTCCCCCGGCATACTATTATCAAAGATCCAGCACTGGAAACCAAGAAAGGGCAGCAACAGAAGCTGACAAGAGTGTGCCTTTGCAGGCTAAACATGCACAACAATGTGGAGTTAATGCCAAGATGGCACCAGATATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGCCATAGAGACAAACTTGCTGCAGCCAAAGGCTCATCAATATGGTGGAATCAGTGCTGCAGCTGGGGCCACTGCTCATAGAAAAGTTGGGTCTGTTCAGTATGGCATGACAAGAATGTTCTAG 1845 0.4125 MQQDHRKKSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTVHPKEQTNIASSKNRPTAEEYNKIPRDTEIPVPRSMQGPQRIPLAKPGKVVGPVVPYEYGNIVKDSYDPRSFIRGSVLPTQPVPPAYYYQRSSTGNQERAATEADKSVPLQAKHAQQCGVNAKMAPDIAINIDTNPFFMTRAGVNKLEQGDQIAIETNLLQPKAHQYGGISAAAGATAHRKVGSVQYGMTRMF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00985 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00985 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pumo1g00985 614 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pumo1g00985 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo1g00985 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 366 - -
Pumo1g00985 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pumo1g00985 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00985 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pumo1g00985 614 FunFam Mitogen-activated protein kinase 111 339 - -
Pumo1g00985 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00985 614 CDD STKc_TDY_MAPK 24 361 - -
Pumo1g00985 614 FunFam Mitogen-activated protein kinase 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00985 Pumo-Chr1 15633473 15639901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00985 1 446 MAP Kinase Gene Family AT2G42880 87.472 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo1g00985 Pkinase 6.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00985 - - gmx:100811788 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00985 1 15633473 15639901 Pumo9g01956 9 49068210 49074961 PCT