LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo1g00969	ATGAGAGACTCTCTTAGCGAAATTCTAGTGTACTACTATCCAGTTGCTGGCAGATTGAGCTTAACAGAAAGTGGTCGAATGGAAGTGGATTGCAACACAAAGGGGGTGACATTGCTCGAAGCCGAAACCACGAAAACAATGGCTGATTATGGAGACTTTTCACCCTCTGAGTCCATCAAGGAAGAACTTGTTCCAACAATTGATTATCAATCTCAACCTATAGAAGAGATTCCTTTGCTATTAGTCCAACTAACAAGATTCCAAGGTGATGATGACCAACAAGGCCTTGCCATTGGAGTGGCTCTCTCACATCCTGTGGCTGATGGGTTTGCTTGGATTAACTTTATCAATAGATGGGCAAAGATTGCTCGAGGAGACATGTTAGATCTTAATGACATGCCATGTCTAGATAGAACTATACTCAAATTTTCAAAGTCGTCGTCGTCGTTGCTGTTGCCACCACCGCCGTGCTTTGATCACCCAGAGTTGCAGCCTTTGCCATTTATACTAGGCAGATTTGACAGCACTGAAGAGCAAAAGAAGAAGACAACAGCTGTTGTGTTAAAACTCACATCAGAACAAGTGGAGATGCTGAAGAAGAAGGCCAATGAAAATCAATCAACAAAACAAGGGTCAAGACCTTGTAGCAGATTTGAAGCTGTGGCTGCACATATTTGGAGATGTGCTTGTAAGGCTCGTGGACTAGATCGCAATCAACCAACTCTTGCTCGGTTCAATGCCGATTTTCGCAACAGATTGATTCCACCTCTTCCTAAGCATTATTTTGGGAATGCTTTGGCAGCAACAGTGACACCAGAATGTTATGTGGGAGAAATCACATCAAAACCGTTGAGTTATGCTGCCCAAAAAATGAGAGAAGCAGTTGAATTGCTCACAGATGAGTACATAAGGTCACAGTTAGAAGTTGTGTTGGATGAGGAGCAATTGGATTGCTTAAAGGCTTTTTTCTCGGGACAAGGAGAACGTAGAATTGCCACGTTTGCAGGGAATCCGAATCTGCAAATCACAAGCTGGATCAGCATGGCGGCGTATGAAGCGGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTCTAGGATACGTGTCTCCATTTGATAGGGGGATTATTATTCGAGGTCCACAAGATGATGGTTCTGTTATGGTGATGATGCATTTCCAGATAGCACATATGCAACTTTTTAAGAAATTCTTCTACGAGGATATATTCTCATCAAGGTTGTAA	1242	0.4283	MRDSLSEILVYYYPVAGRLSLTESGRMEVDCNTKGVTLLEAETTKTMADYGDFSPSESIKEELVPTIDYQSQPIEEIPLLLVQLTRFQGDDDQQGLAIGVALSHPVADGFAWINFINRWAKIARGDMLDLNDMPCLDRTILKFSKSSSSLLLPPPPCFDHPELQPLPFILGRFDSTEEQKKKTTAVVLKLTSEQVEMLKKKANENQSTKQGSRPCSRFEAVAAHIWRCACKARGLDRNQPTLARFNADFRNRLIPPLPKHYFGNALAATVTPECYVGEITSKPLSYAAQKMREAVELLTDEYIRSQLEVVLDEEQLDCLKAFFSGQGERRIATFAGNPNLQITSWISMAAYEADFGWGKPVYFGLGYVSPFDRGIIIRGPQDDGSVMVMMHFQIAHMQLFKKFFYEDIFSSRL	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo1g00969	413	Gene3D	-	1	165	IPR023213	-
	Pumo1g00969	413	Gene3D	-	172	407	IPR023213	-
	Pumo1g00969	413	Pfam	Transferase family	2	406	-	-
	Pumo1g00969	413	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	1	404	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo1g00969	Pumo-Chr1	15443435	15444676	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo1g00969	1	406	Monolignol Biosynthesis Gene Families	AT5G48930	38.424	2.65e-89	275

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo1g00969	K13065		-	gmx:100789491	663.299