Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00964 ATGGTCACATATGAGTATATAAGTTCACAGGTAGGACCACATTGTCGGTACCCTTATGATAAATGTCATTACTCATTAGAGGTCAGGGGCAACTGGATAGTGCAAGGGCTCTATGGGAGTCCTAACGTTCTTATTAGTTGGATGCGCATGCCAATGCATGAAGCAGATTTTGGCTGGGGAAAGCCTGAGTATTTAGGTCTAGGAAATGTGTCTACACAAGATAGGGCATTAATTATTGATTATTCAAAGCCCAGATGGAGACCGCTCTATTGTTTTGTTTATGCACTTCCAGATGGAACATATTCACCTTTTCAAGAAAATCTTTTATGA 330 0.403 MVTYEYISSQVGPHCRYPYDKCHYSLEVRGNWIVQGLYGSPNVLISWMRMPMHEADFGWGKPEYLGLGNVSTQDRALIIDYSKPRWRPLYCFVYALPDGTYSPFQENLL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00964 109 Pfam Transferase family 40 105 - -
Pumo1g00964 109 Gene3D - 2 87 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00964 Pumo-Chr1 15294470 15294958 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00964 38 79 Monolignol Biosynthesis Gene Families AT5G48930 37.209 2.72e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00964 K13065 - gmx:100778626 81.6481