Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00963 ATGACGACATGCCGTTTCTTGATCGAAAACTACTCAAATTCCCACACCAGCCGCCATCGGCACCACGCGTTGATGATCTCCCAGCTGTACCAGGAACAACAACATCAGACTAGTACTACTATTGTTGACTCGAGTGTTGCATTGTTAAAGCTCACGTCAAGCCAGGTGGAGAAGCTAAAGAAGAAAGCTAACGATGAACTTTCAAAAGAAGGGGTAAGAGTAAGACCTTATAGCAGATTTGAAGCTGTTGCTGCGCATATATGGAGATGTGCATCTAAGGCTCGTGAATCATCAGGTGAGAATTTAAACCAACCAACTCTAGTTCAGTTTCCCGTTGATATTCGCAGCAGATTGAATCCACCACTCCCTCAGAATTATTTTGGGAATGCGTTGGCAAAAATTGAGACACCTAAGTGTCATGTGGGAGAAATCACATCAAACCCATTAAGTTATGCTGCTCAAAAGATAAGGGATGCAGTTAATGTGGTTACGGATGAGTATATGAGGTCACATTTTATTTTGGACCAACGGCAATTGGATTGCATTAGGGGTGTTTTCATGGGAAAAGGAAGTCCAAATGACTGCCCCGCATCCTGGGAAGCATAA 606 0.434 MTTCRFLIENYSNSHTSRHRHHALMISQLYQEQQHQTSTTIVDSSVALLKLTSSQVEKLKKKANDELSKEGVRVRPYSRFEAVAAHIWRCASKARESSGENLNQPTLVQFPVDIRSRLNPPLPQNYFGNALAKIETPKCHVGEITSNPLSYAAQKIRDAVNVVTDEYMRSHFILDQRQLDCIRGVFMGKGSPNDCPASWEA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00963 201 Gene3D - 24 199 IPR023213 -
Pumo1g00963 201 Pfam Transferase family 20 171 - -
Pumo1g00963 201 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 30 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00963 Pumo-Chr1 15198144 15199302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00963 43 199 Monolignol Biosynthesis Gene Families AT5G48930 36.875 3.06e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00963 K13065 - gmx:100814459 194.897