Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00956 ATGGCTGAAATTGGTACTGCTGTGGCCTCTACAATAATAGAGCGTGTGGTGGATGCAATTGTATTTCGTGTTCGGTATATACTCCATTTCAACAAATCCGTTGCTGATCTTCAAAAATCAAAGAGAGGGTTGGAAAAGGGATTGCAGCACATGAAAGAACGTGCTAAAGAAGCCACTACAAATGCTGAGAAGATTGTGCAACCAGTTGAAGAGTGGCTGAATAATGTGGAGAAGGTTCTCGAAGATGTGCAAAGGCTGGAAGAAAGGGTGGAAGAAAGCCAATGCTGTTTGAACGTGACGTTTAAGTATTCTATAGCCAAAGAGGTGATATGCATGACACAACAAATGAACGTGCTCAACAGCAACAACAACAAATTTGAGCCATTTTCACACCCCATTGAACTCTCAAGCATGAATTACTTCTTTCCCAACGACTTTGTGGCATTGGATTCTAGGAAGCCAGTTTATGAAGAGCTACTGAAGGCAATCCAAGATGAGAGGAGCAGTGTGATTGGAGTGGTTGGCATGGGAGGGTCGGGTAAAAGCACTTTAGCAAGAGTGGTGGGGAAGCAAGTAGAGGAGTCAAAGCTTTTTGACAAGGTGGTTATGACAATTGTGTCTCAAGATGTCAAAGTGAGAGATATTCAAGGTCAAATTGCTGATCACTTGACTTTCTCATTGATGGAAGAGACAGAACTTGGCAGGGCACTACGGTTATCTCACAGGTTAAAGACTGAGAAGATTCTCATCATCTTGGATGGTGTATGGGAGAAGCTGGACTTGGAAGCTATTGGGATTCCATTAAATGAGAATGAGAAGAGATGTTGCATCCTGCTCACTACGCGCAACCAAGAAGTTTGCACTTCAATGAACTGCCAAAGCATGATTGAACTCTCTATGTTAAATGAAGATGAAGGTTGGACTTTGTTCAAGCAACGTGCACGAATAGATGATGATTCTCCAGAAGACTTGAGAGAGGTGGCGAAGAGAGTCTTCGACAAATGTCAAGGACTGCTAGTTGCCATTCTGACAGTGGCAAGCACTTTAAAGGGAAAGACTTATACAAGTTGGGAATCGGTATTGTCAAGACTAGAAACTTCTGAATCAATCGATGTTCAAGAGGGCTTGACAAGTACCTATGATTGCAATGAATTGGAGGAAATAATTTGCTTGGATTCAAAGGAAGCAGGACAACTTAGATACCTGTATGCTCCTTCCCTACCAGTTTTCCCAAAACTAAGGAAGATCTTAATCAGAGGATGCAATAAGTTGACAAAAATATTTTTCCCAAGCATTGTTTCAAGCCTTCCGGAGTTGAAAACGCTGTCTGTACACAATTGCAATGAATTGGTGGAAATTGTTTCTTCATATTCTTCAGAGGAAGCTAGACAATTCCCAAACCTATCTTTTCCATTTCAACTAGTTTCTTTCCCCAAATTAGGGGTGATTGAGATCAAAAGATGCAACAAATTGAAAACAATCTTCTTTGCAACCATTGTTTCAAGTCTACCAGAGTTGAATGAGTTGTCTGTATGCGACTGTAACAACTTGGAGGATATAATATCTTTGGATTCAGATGAAGCACGACAGCATAGAAATGTAACTCCTCCTTACCAGCAATATTTCCCCAAACTAAGGAGGATTAACATTGAGAATTGCAGCAAATTGAAATCATTATTCTCTTTCACCATAGTTACAAGCCTACCAGAGTTGCAACAACTAGTTGTAAAGGACTGCAACGAATGGGAGGAAATAATCTTTGCAGATTCAGAGCCTGCAGGACAACTTAGACAACTATCTCCTCTTTGCCAACAAGTTTCTTTCCCCAAACTAAGAAGCATCCAGATTGAAAGATGCAATAAATTGAAAACAATCTTCACCATGACGATTGTTACATGCCTACCGGAGTTGATAGAATTGATTGTAAAGGACTGCAACGAATGGGTGGAAACAATTTCTCTAAATTTAGAGCAAGCAAGACATGTTGAAAATCTATCTGCCCATTCCAAACAAGTTTGTTTCCCCAAACTACAGAGGATTGAGATTGAAAGTTGCAAAAAGTTGAAAACAATCTTCTCCATGACCATTGTTACAAGCCTTCCTGAGTTGCAACAACTAGTTGTAAAGAACTGCAATGAATGGGAGGGAGTAATTTCTTCAGATTCAGAGGAACCAAGACAACTTGGAAACCCATCTGCTTCTTCCCAAGAAGTTTATTTCCCCAAATTGAAGAAGATTGAGATTGAAAAATGTAACAAATTGAAAGCAGTCTTTTCTGCAGCTATTGTCACATGCCTACCAGAGTTGGAGCAACTGATTGTAAAGGACTGCGATGAATTGGAGGAAACAATTTCTTTAGATTCAGGTGAAGCTGGAAAACTTAAAAACTTATCTGTTTCTTCCCAACAGGATTGTTTTCCAAAATTGGAATGTATTAGGATTGAAAGATGCTGCAAATTTAAAAGAATGTTTTCTGCAAGCATTGTCAACATCCTACCGGGGTTGGAACAACTAGTTGTAACCGACTGCAATGAATGGATTGAAATAATTTCCTTAGATTCAGTGGATGCAGGACAACTTGGAAACCTAACTGCTTATTGCCAACAAGTTTGTTTCCGCAGGCTGAGGAATATTGAGATCAAAAGATGCAACAAATTGAAATCAATCTTCTCTGCAACCCTTGTTACAAGACTGCCCAGATTGGAGATACTAACTGTGAAGGACTGCAATGAATGGGAGGAAATAATTTCCTTAGATTGTAATAAAGTTGGAGAACTTGGAAACCTATCTGCTTTTTCCCAACATGTTTGTTTTCCCATGCTGCTTGAAATTATCATTGAAAGATGCAACAAATTGAAAGCAATCTTCCCTGCAATCATTTCAAGCCTACCGGAGTTGGTGCGAGTAGTTATAAAGGAATGCAATGATTGGGAGCAAATTATTTCTTTAGACTCAGAGGAAGCAAGACAACTTCAAACCGCATCGGCTACTTCCCAACAAATTTGTATCCCCAAATTGAAATTTATTTCTATTGAAAAATGCAACAAATTGAAAACAGTCTTCTGCACAACCTTGGCTACAAGCCTGACAGGGTTGCTACATCTTGATGTTAAGGACTGCAATGAATTGGAGTATATAATTTCTTTACCTTCAGAGGAAGCAGGGCAACTTGGAAACCTATCTGCTCCTTCTCAACAAGTTTGTTTCCCGAAACTAGGAAGTATTTGGATCCTAGGATGCAACAAAATGAAAACAATCTTCTTTGCAACCATTGTTGCAAACCTATCAAGCTTGAATTCATTGTTTGTAGCCGACTGTGACAACTTGGAGGCTATAGTTTCTCCATATTCAGTGGAAGCAGAACAGCATAGATACCTATCAGCTCCTCCCCATCAAGTCTTTTTCCCTGAATTGAAATGTATTAAGATCATGAAATGCGACAAATTGAAAACTATTTTCTTCAAAACCATTGTTTCAAGCCTACCAGAGTTAGAAAGGCTGTTTGTTTTTGATTGCAACAAATTGGAGGATATGATTTCTTCTGATTCTAAGGAAGTAGGAACCACTTAG 3570 0.3936 MAEIGTAVASTIIERVVDAIVFRVRYILHFNKSVADLQKSKRGLEKGLQHMKERAKEATTNAEKIVQPVEEWLNNVEKVLEDVQRLEERVEESQCCLNVTFKYSIAKEVICMTQQMNVLNSNNNKFEPFSHPIELSSMNYFFPNDFVALDSRKPVYEELLKAIQDERSSVIGVVGMGGSGKSTLARVVGKQVEESKLFDKVVMTIVSQDVKVRDIQGQIADHLTFSLMEETELGRALRLSHRLKTEKILIILDGVWEKLDLEAIGIPLNENEKRCCILLTTRNQEVCTSMNCQSMIELSMLNEDEGWTLFKQRARIDDDSPEDLREVAKRVFDKCQGLLVAILTVASTLKGKTYTSWESVLSRLETSESIDVQEGLTSTYDCNELEEIICLDSKEAGQLRYLYAPSLPVFPKLRKILIRGCNKLTKIFFPSIVSSLPELKTLSVHNCNELVEIVSSYSSEEARQFPNLSFPFQLVSFPKLGVIEIKRCNKLKTIFFATIVSSLPELNELSVCDCNNLEDIISLDSDEARQHRNVTPPYQQYFPKLRRINIENCSKLKSLFSFTIVTSLPELQQLVVKDCNEWEEIIFADSEPAGQLRQLSPLCQQVSFPKLRSIQIERCNKLKTIFTMTIVTCLPELIELIVKDCNEWVETISLNLEQARHVENLSAHSKQVCFPKLQRIEIESCKKLKTIFSMTIVTSLPELQQLVVKNCNEWEGVISSDSEEPRQLGNPSASSQEVYFPKLKKIEIEKCNKLKAVFSAAIVTCLPELEQLIVKDCDELEETISLDSGEAGKLKNLSVSSQQDCFPKLECIRIERCCKFKRMFSASIVNILPGLEQLVVTDCNEWIEIISLDSVDAGQLGNLTAYCQQVCFRRLRNIEIKRCNKLKSIFSATLVTRLPRLEILTVKDCNEWEEIISLDCNKVGELGNLSAFSQHVCFPMLLEIIIERCNKLKAIFPAIISSLPELVRVVIKECNDWEQIISLDSEEARQLQTASATSQQICIPKLKFISIEKCNKLKTVFCTTLATSLTGLLHLDVKDCNELEYIISLPSEEAGQLGNLSAPSQQVCFPKLGSIWILGCNKMKTIFFATIVANLSSLNSLFVADCDNLEAIVSPYSVEAEQHRYLSAPPHQVFFPELKCIKIMKCDKLKTIFFKTIVSSLPELERLFVFDCNKLEDMISSDSKEVGTT 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00956 1189 Gene3D Ribonuclease Inhibitor 788 921 IPR032675 -
Pumo1g00956 1189 Gene3D Ribonuclease Inhibitor 653 787 IPR032675 -
Pumo1g00956 1189 Gene3D Ribonuclease Inhibitor 464 587 IPR032675 -
Pumo1g00956 1189 Gene3D - 140 298 IPR027417 -
Pumo1g00956 1189 Pfam NB-ARC domain 155 389 IPR002182 GO:0043531
Pumo1g00956 1189 SUPERFAMILY RNI-like 406 646 - -
Pumo1g00956 1189 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 478 700 - -
Pumo1g00956 1189 PRINTS Disease resistance protein signature 335 349 - -
Pumo1g00956 1189 PRINTS Disease resistance protein signature 170 185 - -
Pumo1g00956 1189 PRINTS Disease resistance protein signature 434 450 - -
Pumo1g00956 1189 PRINTS Disease resistance protein signature 242 256 - -
Pumo1g00956 1189 Coils Coil 34 61 - -
Pumo1g00956 1189 SUPERFAMILY RNI-like 740 978 - -
Pumo1g00956 1189 SUPERFAMILY RNI-like 628 1178 - -
Pumo1g00956 1189 Gene3D Ribonuclease Inhibitor 983 1179 IPR032675 -
Pumo1g00956 1189 Coils Coil 69 96 - -
Pumo1g00956 1189 Gene3D - 300 383 IPR042197 -
Pumo1g00956 1189 FunFam Probable disease resistance protein At1g61300 134 294 - -
Pumo1g00956 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 381 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00956 Pumo-Chr1 14760566 14765136 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00956 171 392 WRKY Transcription Factor Family AT5G45050 27.350 1.26e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00956 - - aprc:113854242 1593.17