Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00954 ATGGCTGAATTAGGTACAGCTGTGGCTTCAAAAATAATAGAGCGTATGGTGGATGCAATTATAGGTCGTGCTCAATATTTCTTCTGTTTCCACAAATCTGTTATTGATCTTCGAAAATCAAAGAGAGAGTTGGAGAAGGCATTGCAGCACATGAAAGAACGTGCTAAAGAAGCCTCTACAAATGCTGAGAAGATTGTGCAACCAGTTGAAGAGTGGCTGAATAATGTGGAGAAGGTTCTTGAAGATGTGCAGAGGCTGGAAGAAAGGGTGGAAGAAAGCCAATGCTGTTTGAACGTGACATTTAAGTATTCTCTAGCAAAAGAGGTGATATGCATGACGCAGCAAATGAACCTGCTCAACAATAATGACAAATTTGAGCCATTTTCACACCCCATTGAACTCTCAAGCATGAATTACTTCTTTCCCAAAGACTTTGTGGCATTGGATTCTAGGAAGCCAGTTTATGAAGAGCTACTGAAGGCAATCCAAGATGAGAGGAGCAGTGTGATTGGAGTGGTTGGCATGGGAGGTTCGGGTAAAAGCACTTTAGCAAGAGTGGTGGGGAAGCAAGTGGAGGAGTCAAAGCTTTTTGACAAGGTGGTTATGACAATTGTGTCTCAAGATGTCAAAGTGAGAGATATTCAAGGTCAAATTGCTGATCACTTGACTTTCTCATTGATGGAAGAGACAGAACTTGGAAGGGCACTGCGGTTATCTCACAGGTTAAAGACTGAGAAGATTCTCATCATCTTGGATGGTGTATGGGAGAAGCTGGACTTGGAAGCTATTGGGATTCCATTAAATGAGAATGAGAAGAGATGTTGCATCCTCCTCACTACGCGCAACCAAGAAGTTTGCACATCAATGAACTGCCAAAGCATGATTGAACTCTCTATGTTAAATGAAGATGAAGGTTGGACTTTGTTCAAGCAACGCGCACAAATAGATGATGATTCTCCAGAAGAATTGAGAGAGGTGGCAAAGAGAGTCTTTGACAAATGTCAAGGACTGCTTGTTGCCATTCTGACAGTGGCAAGCACTTTAAAGGGAAAGACTTGTACAAGCTGGGAATTGGCATTTTCAAGACTAGAAACTTCTGAATCCATTGATGTTCTAGAGGGCTTGACAAGTACATATGAATGCAATGAATTGGGGGAAATAATTTGCTTGGATTCAAAGCAAGCAGGACAACTTAGATACCTGTATGCTCCTTCCCAACCAGTTTTCCTCAAACTATGGAATATCTTAATCAAAGAATGCAACAAATTGAGAAAAATCTTCTTTCCATGCCTTGTTACAAGCCTACCAGAGTTGAAAAAGTTTGAAGTACAAGATTGCAATGAATTGGTGGAAATTATTTCTTCATATTCTTCACAGGAAGCTAGACAATTCCCAAACCTATATTTTCCATCTCAACAAGTTTCTTTCCCCAAATTGGGGGTGATTAAGATAAAAAGATGCAACAAATTGAGGACAATCTTCTGTGCGCCCATTGTTTCAAGCCTACCAGAGTTGAATGAGTTGTCTGTATGCAACTGTAACAACTTGGAGGATATAATATCTTCAAATTCAGATGAAGCACGACAGCATAGAAATGTAACTGCTCCTTACCAGCAATATTTCCCCAAACTATGGAGGATTAACATCGAGAATTGCAACAAATTGAAAACATTCTTCTCTTTGACCATAGTTACAGGCCTACCAAATTTGCTTGAGTTGATTGTAAAGAACTGCTACGAATGGGTGGATATAATTTCTTTAGATTTAGAGCAAGCAAGACAAGTTCGAAACCTATCCACACATTCCAAACAAATTTGTTTCCCCAAACTGCAGAGGATTGAGATCGAAAGTTGCAAAAAATTGAAAACAATCTTCTCTGCAGCCATTGTTTCAAGCCTTCCGGAGTTGGAACAACTACTTGTAAAGAACTGCAATGAATGGGAAGGAATTGTTTCTTTAGATTCAGAGGAAGAAAGACATCCTAGAAACCTATCTTCTTCTTCCCAAGAAGTTTGTTTCCCCAAATTGAGGAAGATTGAGATTGAAAAATGTAACAAATTGAAAGCAATCTTCTCTACAATCATTGTCACAAGCCTACCGGAGTTGGAGAAACTGATTGTAAAGGACTGCAATGAATTGGAAGAAATAATTTCCTTGGGTTCAGATGAAGCTGGACAACTTCAAAACTTATCTGTCCCTACGGAACAAGTTTGCTTTCCAAAACTGAGAAATATTAGTATTGAAAGATGCTCCAAAATTAAAAGAATGTTCTCCTCTGTCATTGTTAAAATCCTACCAAAATTGGAACAATTGGTTGTAAAGGATTGCAATGAATGGGAGCAAATAATTTCCTTAAATTTAGAGGAAGCAAGTGAGCTTAGAAATGTTTCCACTCCTTGCCATCAAGTTTGTTTCCCTAAAATGTGGGAGATTGAGATTGAAGGCTGCAGAAGATTGAAAGCAATTTTCTCTTCAACCATTCTTACTAGACTGCCAATGTTGGAGGAACTGTTTGTAAAGGACTGCAGAGAATTGGAGGAAATAATTTCCTTGGATTCACAGGAAGCTAGGCAACTTAGAAACCAATCTTCACCTTTCCAACAAGTCTGCTTCCCCAAACTGAGGATGATTGACATAAAAAGTTGCAACAAATTGAAAGCAATTTTTTCTGCTACCGTTGTTAAGAGACTACCAATTCTGGTGCATCTGACTGTGAAGGATTGCAATGAATGGGAGGGGATAGTTTCTTTAGATTCAGTGGACGTAAGACAACTTGGAAACCTATTTACTTCTTCCCAACAAATTTATTTCCCTATGCTGAGGGAATATTGA 2832 0.3905 MAELGTAVASKIIERMVDAIIGRAQYFFCFHKSVIDLRKSKRELEKALQHMKERAKEASTNAEKIVQPVEEWLNNVEKVLEDVQRLEERVEESQCCLNVTFKYSLAKEVICMTQQMNLLNNNDKFEPFSHPIELSSMNYFFPKDFVALDSRKPVYEELLKAIQDERSSVIGVVGMGGSGKSTLARVVGKQVEESKLFDKVVMTIVSQDVKVRDIQGQIADHLTFSLMEETELGRALRLSHRLKTEKILIILDGVWEKLDLEAIGIPLNENEKRCCILLTTRNQEVCTSMNCQSMIELSMLNEDEGWTLFKQRAQIDDDSPEELREVAKRVFDKCQGLLVAILTVASTLKGKTCTSWELAFSRLETSESIDVLEGLTSTYECNELGEIICLDSKQAGQLRYLYAPSQPVFLKLWNILIKECNKLRKIFFPCLVTSLPELKKFEVQDCNELVEIISSYSSQEARQFPNLYFPSQQVSFPKLGVIKIKRCNKLRTIFCAPIVSSLPELNELSVCNCNNLEDIISSNSDEARQHRNVTAPYQQYFPKLWRINIENCNKLKTFFSLTIVTGLPNLLELIVKNCYEWVDIISLDLEQARQVRNLSTHSKQICFPKLQRIEIESCKKLKTIFSAAIVSSLPELEQLLVKNCNEWEGIVSLDSEEERHPRNLSSSSQEVCFPKLRKIEIEKCNKLKAIFSTIIVTSLPELEKLIVKDCNELEEIISLGSDEAGQLQNLSVPTEQVCFPKLRNISIERCSKIKRMFSSVIVKILPKLEQLVVKDCNEWEQIISLNLEEASELRNVSTPCHQVCFPKMWEIEIEGCRRLKAIFSSTILTRLPMLEELFVKDCRELEEIISLDSQEARQLRNQSSPFQQVCFPKLRMIDIKSCNKLKAIFSATVVKRLPILVHLTVKDCNEWEGIVSLDSVDVRQLGNLFTSSQQIYFPMLREY 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00954 943 FunFam Probable disease resistance protein At1g61300 133 293 - -
Pumo1g00954 943 Pfam NB-ARC domain 154 387 IPR002182 GO:0043531
Pumo1g00954 943 Gene3D Ribonuclease Inhibitor 397 728 IPR032675 -
Pumo1g00954 943 SUPERFAMILY RNI-like 672 918 - -
Pumo1g00954 943 Gene3D - 139 297 IPR027417 -
Pumo1g00954 943 PRINTS Disease resistance protein signature 241 255 - -
Pumo1g00954 943 PRINTS Disease resistance protein signature 169 184 - -
Pumo1g00954 943 PRINTS Disease resistance protein signature 334 348 - -
Pumo1g00954 943 PRINTS Disease resistance protein signature 869 885 - -
Pumo1g00954 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 379 IPR027417 -
Pumo1g00954 943 Coils Coil 34 61 - -
Pumo1g00954 943 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 396 633 - -
Pumo1g00954 943 SUPERFAMILY RNI-like 411 651 - -
Pumo1g00954 943 Coils Coil 842 862 - -
Pumo1g00954 943 Gene3D - 299 381 IPR042197 -
Pumo1g00954 943 Coils Coil 69 96 - -
Pumo1g00954 943 Gene3D Ribonuclease Inhibitor 729 864 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00954 Pumo-Chr1 14752293 14756218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00954 170 391 WRKY Transcription Factor Family AT5G45050 27.350 1.53e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00954 - - aprc:113854242 1295.03