Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00936 ATGAGTTGCTTTCCTTGTTGTACATCACAAGGGAGGCTCAACAAGAAGACATTGAAGAAGAGCATTAAGGAATACCATGAAGAAAAAATTCTAGCCTCATTTGCCAACATCTCTTTAAAAACAGATAGTGGCAAGCGAAAGCTGATAACAAATGAGTTAGCAAAGCTTGGGAAAGAAAACATCACCTCTAAGGTCTTTTCTTATCGTGAGCTATGTGTTGCAACTCAGAACTTTCACCCTACCAATATGATTGGTGAAGGAGGCTTTGGGAGGACTAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGAACAAGCAAACCCACCAGTGATATACCGTGATTTCAAAGCATCAAACATACTGCTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAGGCTTGGTCCAACTGGAGATCAATCACATGTGTCCACCAGAGTGATGGGAACATACGGCTATTGTGCTCCTGAGTATGCATCAACAGGGCAGTTGACTGCAAAATCAGATGTGTACAGCTATGGAGTTGTGTTTTTGGAGATGATCACTGGAAGAAGAGTAATTGATAACACAAGACCATCAGAAGAGCAACATTTAGTTGATTGGGCACAACCACTTCTGAAAGATAGAACGAAATTTACACAAATGGCTGATCCATTGCTAGAAGAAAACTACCCCATAAAGAGTCTATACCAAGCTCTAGCAGTAGCAGCAATGTGTCTTCAGGAGGAAGCCGATACCCGACCTTTGATCAGTGATGTAGTTACAGCCATTGAGTTTTTAGCGAGGAAGAAAGTAGAAGTGAATGAACCACAAGATACAAAAGAGACTTCTACTCAAGATGGAGATAGTAGTGAACACAACGAATCTAACGAGGAAGATGATGACGACGATGATGACGATGACGATGACGATGATGATGAGAATGAGGAGGAGAAGGATAAGAACGTTGATATCAACAAAAAAGAACAGTGTATGTGA 1005 0.407 MSCFPCCTSQGRLNKKTLKKSIKEYHEEKILASFANISLKTDSGKRKLITNELAKLGKENITSKVFSYRELCVATQNFHPTNMIGEGGFGRTRMKIAEGAAKGLEYLHEQANPPVIYRDFKASNILLDENFNPKLSDFGLARLGPTGDQSHVSTRVMGTYGYCAPEYASTGQLTAKSDVYSYGVVFLEMITGRRVIDNTRPSEEQHLVDWAQPLLKDRTKFTQMADPLLEENYPIKSLYQALAVAAMCLQEEADTRPLISDVVTAIEFLARKKVEVNEPQDTKETSTQDGDSSEHNESNEEDDDDDDDDDDDDDDENEEEKDKNVDINKKEQCM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00936 334 ProSiteProfiles Protein kinase domain profile. 1 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00936 334 PANTHER OS07G0668900 PROTEIN 92 280 - -
Pumo1g00936 334 Gene3D Phosphorylase Kinase; domain 1 50 94 - -
Pumo1g00936 334 SUPERFAMILY Protein kinase-like (PK-like) 62 268 IPR011009 -
Pumo1g00936 334 MobiDBLite consensus disorder prediction 277 294 - -
Pumo1g00936 334 MobiDBLite consensus disorder prediction 277 334 - -
Pumo1g00936 334 Pfam Protein kinase domain 95 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00936 334 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
Pumo1g00936 334 FunFam Serine/threonine-protein kinase PBS1 89 285 - -
Pumo1g00936 334 MobiDBLite consensus disorder prediction 295 321 - -
Pumo1g00936 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 115 127 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00936 Pumo-Chr1 14484610 14487652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00936 60 92 Glycoside Hydrolase AT3G07070 57.576 3.27e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo1g00936 Pkinase 9.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00936 - - gmx:100790474 372.474