Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00907 ATGGCAACAGCCACCGTAACCACTGCCCCCTATGGATCATGGAAGTCCCCCATCACCAGTGATGATGTCTCCGGCGCCACCAAGGATCTCGGTGGCACCGCCGTCGATGGCCGTGGCCGCCTCATTTGGCTCGAATTCCGTCCAACGGAATCAGGGCGGGGAGTTCTTGTTCTTGAGCCGGAAAAGAATGGAGGTGAAGCGGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGTGGTGCCTTCACTGTTTCAGGGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGATTATACAAGCAGTCCATTAGTTCTCTAGATGTGCCCCCTGTACCGCTCACTCCAGATTATGGTGGACCTTTAGTCAGCTATGCCGACGGAAGATTGGATGCACGCTTTAACCGATTTATTAGTGTTAGGGAAGATCGTCGCGAAAGCAGTCTAAATCCACCTACAACAATTGTATCTATAGCACTTGGCAGCAAGGATGTTCAGGAACCAGAAGTGCTAGTTAGCGGGAGTGACTTCTATGCTTTCCCCCGTCTAGATTCTAAAAGTGAAAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCGTGGGATAAAACAGAACTTTGTGTTGGATATATTTCTGAAAATGGTGAGATCTACAAGCGCGTTTCTGTTGCTGGGTATGATTCTTCAGTTGTGGAGTCTCCAACTGAGCCCAAGTGGTCCCCTGATGGGGAGCTGTTTTTCGTGACAGATAGGGAAAATGGTTTTTGGAATATCCACAAATGGATTGAGTCTGAGAATAAGGTTGTGTCTGTTTATTCTTTGGAAGCTGAGTTTACAAGGCCTCTGTGGACTTATGGTATGAATTCTTATGAATTTGTTCAAAGTTCTAAACAGAGAAACTTAATTGCTAGCAGTTACAGGCAGCATGGGAAGTCATATCTGGGAATTATTGATGTGCAGGGCTCAAAGCTAACTGTGATTGATTTCCCTTGCACAGATATAAATAACATAACGTCTGGTAATGATTGCCTATACTTGGAGGGAGCATCTGAGGTTCTTCCATCGTCAGTGGCCAAGGTGACTTTTGATGATGATAAAACAAAAGCAGTGGACTTCAATATTATTTGGTCCTCCTCACCAGACAGTTTAAAGTATAGTTCCTACATCAGTAAACCAGAGTTTATTGAATTCCCAACTGAAGTTCCAGGTCAAAATGCCTATGCATACTTTTATCCACCATCTAATCCTGATTTCCAAGCTAGTGAAGAAGAAAAGCCTCCATTGTTATTGAAGAGCCACGGTGGACCAACTCAAGAAACTCGTGGAATTTTAAATTTGAGCGTTCAGTACTGGACTAGTCGAGGTTGGGCAGTCGTTGATGTTAATTATGGTGGAAGCACTGGTTATGGCAGGGCGTACAGAGAGCGGCTTTTGGGACAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACATATTTGGTGGACAGTGGAAAGGTGGATAAGGAACGGCTGTGTATTATGGGGGGCTCTGCTGGTGGGTATACCACCTTGGCTGTTCTTGCTTTCAGAAAAACTTTTCAGGCCGGGGCTTCTTTGTATGGTATAGCTGACTTGAAGTTGTTGAGAGCAGAAACTCATAAATTCGAATCCCATTACGTCGAAAACCTAGTTGGAGGTGATAAGGAGATGTATGATAGATCCCCTATCAATCATGTTGACGATTTTTCTTGTCCCATTATTATATTTCAAGGATTGGAGGACAAGGTTGTGCCACCGGATCAAGCTCGGAAAATATACCAGGCAGTGAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACACGGTTTCCGAAAGGCTGAGAACATTAAGTTTACACTTGAACAAGAAATGGTCTTCTTTGCACGATTGATTGGGCACTTTGAAGTTGCTGATGATATTACTCCCATCAAAATTGACAACTTTGATGACTAA 2019 0.4398 MATATVTTAPYGSWKSPITSDDVSGATKDLGGTAVDGRGRLIWLEFRPTESGRGVLVLEPEKNGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYNDQRLYKQSISSLDVPPVPLTPDYGGPLVSYADGRLDARFNRFISVREDRRESSLNPPTTIVSIALGSKDVQEPEVLVSGSDFYAFPRLDSKSERIAWIQWNHPNMPWDKTELCVGYISENGEIYKRVSVAGYDSSVVESPTEPKWSPDGELFFVTDRENGFWNIHKWIESENKVVSVYSLEAEFTRPLWTYGMNSYEFVQSSKQRNLIASSYRQHGKSYLGIIDVQGSKLTVIDFPCTDINNITSGNDCLYLEGASEVLPSSVAKVTFDDDKTKAVDFNIIWSSSPDSLKYSSYISKPEFIEFPTEVPGQNAYAYFYPPSNPDFQASEEEKPPLLLKSHGGPTQETRGILNLSVQYWTSRGWAVVDVNYGGSTGYGRAYRERLLGQWGIVDVNDCCSCATYLVDSGKVDKERLCIMGGSAGGYTTLAVLAFRKTFQAGASLYGIADLKLLRAETHKFESHYVENLVGGDKEMYDRSPINHVDDFSCPIIIFQGLEDKVVPPDQARKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKFTLEQEMVFFARLIGHFEVADDITPIKIDNFDD 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00907 672 Gene3D alpha/beta hydrolase 392 660 IPR029058 -
Pumo1g00907 672 SUPERFAMILY Tricorn protease domain 2 86 353 - -
Pumo1g00907 672 Pfam Prolyl oligopeptidase family 455 654 IPR001375 GO:0006508|GO:0008236
Pumo1g00907 672 SUPERFAMILY alpha/beta-Hydrolases 399 652 IPR029058 -
Pumo1g00907 672 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 4 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00907 Pumo-Chr1 13635119 13644234 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00907 2 671 Carbohydrate Esterase AT5G36210 70.641 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00907 - - gmx:100794040 1312.36