Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00871 ATGCTCCACAGCCTAGAGTACTTGGATCTAAGGATTAACATACCAAGAGAGATCAACAAGCTTAAAAAGCTAAGTCACCTTCTAGGTTACGAGCTTCTAATGGTGGAATTGAAAGGCATTGGAAAGCTAGGATCCCTGCAAACGCTACGTGAAGTGGAAATAAGTGAAGTAGAGCTATCAAAAGAGCATGAAAGACTTGCACAATTAAGGGTGTTAAGCTTGACTAAGAAATCAGAGCTTAGACTTAAGATGGAGAGGGTGAAGAAAATTGCAGTGTCCTTGGTGAATTCAGTCAAGGAGGTCCCGAAAGACGTTGAAGACATGAATGACAAACTTGATGAGATTCAAGCCATCATTCATGATGCAGATATGATGACAGATAAGATGGCAGATAAGATGGAAGCAGCTGGCAAACCAACTTACGAAATCAAAGCAAAGGTGAAGCAGCTGGTAGAAAATTCTTTTCGCATGGAAGATATCATTGATGAATATACGATCCATGAGGAAAGACAGCTTCGTGATGATCCTGGATGTGTAGCTTTACCTTGCAAGACTGTTGACTTCGTCAAAACTATGACCTCTCGTCTTCAATTCTCGTATATGAATGAGGATGTTAAATCAGAGTTTGATGCAATCAAGTTCAAGGGCAGGAATGAAAGTGAGGACAGCTCCCAAATGCAATCTTCTGGAGGAAACCAAAACACCATGATCCAGAAGTTTCCAATGGCTCCTCTGTATATGGAGGAAGCTGAGGTTGTGGGCTTTGAAGAGCCGAGAGATAAATTGATTCACTGGCTAGTAAGTGAAAGATCAAATCGTAACGTTATCTCTGTGGTAGGAATAGGAGGTCAAGGAAAAACAACTCTCGCCAAAATAGTTTTTGACAACATGAAGGTGATTCAGCACTTCAGGTGTCGTGCATGGATCACAGTGTCTGAGTTTTACACGGCTGAAGGATTGTTGAGGGGCTTGTTGCATCAGTTCTACCAAGAAAAAGGGCAGAATCTTCCACAGAATGTTGTTGCAATGGATCAAACTTCGTTGATACATGAAGTGAGAAAATATTTGCATCACAACAGGTATGTTGTCGTGTTTGATGACGTGTGGAATGAAAGTTTCTGGGATGAATTGGAATTTGCTTTAATAGATAATAAAAATGGAAGTAGGATACTTATCACAACCAGGAACATGCGTGTTGCGATGTCCTGTAAGAGATCTGCTTTTGTTCAAGTGCATGAGTTGCAACCTTTAACTCTTGACGAATCTTTGAAATTGTTTTGTAAAAAGGTTTTTCGATCTGACTTGGATGAATATTGTCCAGACAATCTTAAAAGCATATCCATTGAAATTGTAAAGAAATGCAAAGGTTTGCCACTGGCAATTGTGGCCATTGCTGGTATTTTATCTTGCAAAGACAGAGCTGTACTTGAATGGCAAAGATTTAGTCAAAATCTAAGTTCAGAATTAGAGAAGATTTTCCAGATGACTGATGTGACAAAAAAATTGAGTCTCAGTTATCATGATTTGCCGTACAATCTCAAACAATGCTTCTTGTATTTTGGAATATATCCAGAAGATTACAAAGTTGAATGTGTGAGATTAATTCAACAATGGGTAGCTGAGGGGTTTGTCAAATACAAAGCAAGCAGAACTTTAGAGGAAGTTGCAGAACAATATTTAAATGAGTTCATTCAAAGAAGTTTGGTTCAAGTATCCTCATTTACTGGTGATGGAAAACCTAAAACTTGTCGTGTTCATGATTTAGTACGACAAATGATCCTTAAAAAGACTGGAGATTTAAGTTTTTGTCATTTTGCTGGTGAGAATGGGAACCTGTCAGAGAGTGGGATGGTTCGTCGCCTAACAATAGCATCTGGTTCCAACAATTGGATGGAAAGTGATAAAACCTCAAACATTCGATCACTGCATGTTTTTAGGGATGAAGAATTACCAGAATCCTTTGTGAGTAGTATCCCTACCAAGTACAGGCTACTAAAGGTACTTGATTTTGAAAAAGCTGCATTGTTTAATTATGTTCCAGAAAATTTGGGGGATTTATTCCTTTTGAGGTACTTAAGCTTCAGAAATACAAAGGTAACCAATCTTCCAATATCAATTGGTATGCTCCACAACCTAGAGACCTTGGATCTAAGGCAAACTGCTGTGCGTGAGATGCCAATCGAGGTTAAGAAGCTCACAAAGCTAAGACACCTTCTAGCTTATGATACTTCTAAAGGGGTTGGATATGGGCTTCAAATGAAGGATGGCATTGGACAGCTCACATCCCTACAAATGCTACGTGAAGTAGAAACAAATCATGGTGGAGTGGAGCTAATAAAAGAGATTGAAAGACTCACACAGTTAAGGGTGTTGGGGTTGACTAATGTTAAGCAGGAATTCAGAAATGATCTATGCTCTTTAATAAACAGGATGCAACACATGGAGAAGCTATACGTTACTGCAATTGATGAACATGAAGTCATTGATTTGCATTTTAATGTATATGCGCCCATACTTCGGAAGGTTACCCTTGTAGGGAAGTTAATTCAGTTCCCAAACTGGGTTGCAAAGCTCCAATATCTTGTTACGTTGTCCTTGTCACACTCCAAGTTAACTGATGATCCATTGGCACTACTTAAAGATCTACCAAATTTGTTGTGCCTCAGTATCCTCTACTGTGCATATGGAGGAAAATGTTTGCATTTTCCAAATGGGGGGTTTCCGAGGCTAGAGCAAATAGTACTCAGACGTTTGGATAATTTGAATTCCATCCTTATTGATAATGGAGCATTGCTTTCTCTCAAAAAGTTCAAGTTAGTCAATATCCCCCAACTGACGGAGGTGCCTTCTGGTGTCTACAGCTTACCGAAGCTTGAGGTTTTCCATGCTATTAATATGTCAAATGAATTTGAAGAAAACTTTCATCGCAACAGGAGACAACATGAATGGATAATAGATCAGGTGCCGTCTGAAAGTATAGTCGACAGATTTTGGGCACCAAAAAAGTCCGACTTTCAAAGTATAGGCTGTGAGATTTTAGTGTCATGTGATTCTTATTCTCCTCGTGAACTTTCACTACAATGA 3084 0.3914 MLHSLEYLDLRINIPREINKLKKLSHLLGYELLMVELKGIGKLGSLQTLREVEISEVELSKEHERLAQLRVLSLTKKSELRLKMERVKKIAVSLVNSVKEVPKDVEDMNDKLDEIQAIIHDADMMTDKMADKMEAAGKPTYEIKAKVKQLVENSFRMEDIIDEYTIHEERQLRDDPGCVALPCKTVDFVKTMTSRLQFSYMNEDVKSEFDAIKFKGRNESEDSSQMQSSGGNQNTMIQKFPMAPLYMEEAEVVGFEEPRDKLIHWLVSERSNRNVISVVGIGGQGKTTLAKIVFDNMKVIQHFRCRAWITVSEFYTAEGLLRGLLHQFYQEKGQNLPQNVVAMDQTSLIHEVRKYLHHNRYVVVFDDVWNESFWDELEFALIDNKNGSRILITTRNMRVAMSCKRSAFVQVHELQPLTLDESLKLFCKKVFRSDLDEYCPDNLKSISIEIVKKCKGLPLAIVAIAGILSCKDRAVLEWQRFSQNLSSELEKIFQMTDVTKKLSLSYHDLPYNLKQCFLYFGIYPEDYKVECVRLIQQWVAEGFVKYKASRTLEEVAEQYLNEFIQRSLVQVSSFTGDGKPKTCRVHDLVRQMILKKTGDLSFCHFAGENGNLSESGMVRRLTIASGSNNWMESDKTSNIRSLHVFRDEELPESFVSSIPTKYRLLKVLDFEKAALFNYVPENLGDLFLLRYLSFRNTKVTNLPISIGMLHNLETLDLRQTAVREMPIEVKKLTKLRHLLAYDTSKGVGYGLQMKDGIGQLTSLQMLREVETNHGGVELIKEIERLTQLRVLGLTNVKQEFRNDLCSLINRMQHMEKLYVTAIDEHEVIDLHFNVYAPILRKVTLVGKLIQFPNWVAKLQYLVTLSLSHSKLTDDPLALLKDLPNLLCLSILYCAYGGKCLHFPNGGFPRLEQIVLRRLDNLNSILIDNGALLSLKKFKLVNIPQLTEVPSGVYSLPKLEVFHAINMSNEFEENFHRNRRQHEWIIDQVPSESIVDRFWAPKKSDFQSIGCEILVSCDSYSPRELSLQ 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00871 1027 FunFam Probable disease resistance protein At1g61300 236 407 - -
Pumo1g00871 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 520 IPR027417 -
Pumo1g00871 1027 Gene3D Ribonuclease Inhibitor 627 980 IPR032675 -
Pumo1g00871 1027 SUPERFAMILY L domain-like 584 990 - -
Pumo1g00871 1027 Gene3D - 81 198 - -
Pumo1g00871 1027 Gene3D - 233 411 IPR027417 -
Pumo1g00871 1027 Pfam Rx N-terminal domain 88 172 IPR041118 -
Pumo1g00871 1027 FunFam Probable disease resistance protein At1g63360 506 595 - -
Pumo1g00871 1027 Gene3D - 506 597 IPR036388 -
Pumo1g00871 1027 Gene3D - 417 505 IPR042197 -
Pumo1g00871 1027 PRINTS Disease resistance protein signature 275 290 - -
Pumo1g00871 1027 PRINTS Disease resistance protein signature 454 468 - -
Pumo1g00871 1027 PRINTS Disease resistance protein signature 355 369 - -
Pumo1g00871 1027 PRINTS Disease resistance protein signature 707 723 - -
Pumo1g00871 1027 PANTHER DISEASE RESISTANCE PROTEIN RP 117 931 IPR044974 GO:0006952
Pumo1g00871 1027 Pfam NB-ARC domain 257 506 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00871 Pumo-Chr1 13296999 13302875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00871 276 461 WRKY Transcription Factor Family AT5G45050 30.457 1.83e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00871 K13457 - gmx:100782760 1061.98