Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00860 ATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCGGCCTTCGGCGGAGGCGGCGGTGGCGGTCCGCCGCAGTCGTCTAGTGGCGGCGCCGGAGCACAGGGCTCCGGCGCTGGCAAGGATCGGAAGATGGCATCGGCGGAGCAACTCGTGCTCGAACTCAGCAACCCTGAGCTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCGTTGCTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGCAGTGAACTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGACGATGTGGGCTTGGACTATATTTGTACTACAGCTGAGCGCTTTTTCGCAGTAGGTCGAGTTTTGGGGAACATGGTGACAGCTCTTGCTGAGCAACCGTCATCTCGTCTATTGAAGCATATCATTCGGTGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTGCCAGACATGTTAAGAGATGCTACTTTCAGCAGTTGCCTTCGTGAAGACCCAACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCATATGATTGTGACCTGA 984 0.4766 MSNLPQSLSMGAAFGGGGGGGPPQSSSGGAGAQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVTALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00860 327 PANTHER UNCHARACTERIZED 42 310 IPR007216 GO:0006402|GO:0030014
Pumo1g00860 327 SUPERFAMILY ARM repeat 51 279 IPR016024 -
Pumo1g00860 327 MobiDBLite consensus disorder prediction 1 41 - -
Pumo1g00860 327 FunFam Cell differentiation protein RCD1 39 310 - -
Pumo1g00860 327 Pfam Cell differentiation family, Rcd1-like 49 307 - -
Pumo1g00860 327 Gene3D - 38 308 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00860 Pumo-Chr1 13153540 13161992 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pumo1g00860 Rcd1 3.2e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00860 K12606 - gmx:100784529 602.823