Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00849 ATGGGTATGTTGCCGCTGAATTTGATTCCTGAGGTAGTGAGGAATTTGGCTCATGAGCACGCACAAGTGGTGCCCATATCACTCTTTGTGGCTGTTCTATGCCTCTGCTTGGTCATTGGTTACTTGCTTGAGGAAAATCGATGGGTTAATGAATCCATTGTTGCCATTATAGTAGGATTCATTGCTGGAATTATACTGTTATTAGTCACCAAAGGGAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTCACCATCATGCTGTTTGGGGTGATCGGTGTTTTTATTTCAGTGTCAGTTATTACATGCGGCAGCTGGTGGCTGTTCCCCAAGTTGAAGTTGCTTGGCCTGACTGGGAAAGATTATCTCGCTATAGGAACAATTTTCTCATCAACGGACACGGTTTGCACACTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAGACTTAGTGGCAAGACGTTCCGTGTTATTGGAGATTTCTTGTATCTATTTATAACAAGCACTGGTCTTGGAGTTATAGCTGGCCTTCTCACAGCATATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTTCGTTGATGATCTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATTTGATCTAAGTGGAATCCTCACCGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGATGCCCTTGACATTGAAAAGTGGAAGATGACCCAATTAAGTTATGGAAATTTGATGGGGATATACAGTTCCTTAATCCTATTGATATTGCTTGGGCGTGCTGCATTTGTTTTCCCTCTCTCTGCTCTTGCCAATTATACGAACACACATGCTACTACTAACCAAGCATCAAGTATCACATTCAAACATCAGATAATCATTTGGTGGGCTGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCGAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACTATTATTGTTGTCCTTTTTAGCACACTGGTGTTTGGTTTTCTCACAAAACCACTAATTAGATATCTGCTTCCCCACAGTGCAACAAGGAAAAACATCATCCATGAAGAATCAGGTCCACCAGTTGACGACTTGAATCTTCCTTTGCTATCCCTTGAGGAGTCAGCAGCAACCAACATCAGCCGCGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGCCCTGTGTTCACCATACATCGTTATTGGAGGAGGTTCGATGATGCCTACATGAGACCAATATTTGGGGGACCTCATGGTAACCAGTCACAGTGCTAG 1590 0.4113 MGMLPLNLIPEVVRNLAHEHAQVVPISLFVAVLCLCLVIGYLLEENRWVNESIVAIIVGFIAGIILLLVTKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFFTIMLFGVIGVFISVSVITCGSWWLFPKLKLLGLTGKDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGKTFRVIGDFLYLFITSTGLGVIAGLLTAYILKALSFGRHSSVREISLMILMAYLSYMLAELFDLSGILTVFFCGILMSHYAWYNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSYGNLMGIYSSLILLILLGRAAFVFPLSALANYTNTHATTNQASSITFKHQIIIWWAGLMRGAVSIALAFEQFTFSGVTSDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSATRKNIIHEESGPPVDDLNLPLLSLEESAATNISRAKESLSMLIESPVFTIHRYWRRFDDAYMRPIFGGPHGNQSQC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00849 529 Gene3D - 145 197 - -
Pumo1g00849 529 PANTHER SODIUM/HYDROGEN EXCHANGER 19 524 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pumo1g00849 529 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo1g00849 529 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo1g00849 529 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo1g00849 529 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo1g00849 529 Pfam Sodium/hydrogen exchanger family 32 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00849 Pumo-Chr1 12983260 12989188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00849 4 529 Antiporters AT5G55470 70.621 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00849 - - gmx:100813332 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00849 1 12983260 12989188 Pumo1g00849 1 12983260 12989188 ECH