Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00832 ATGACGCCGAGTGTTAAGCCTGATGCATTTGACAAAGACTCAGAACCATTTGTTGAAATTGATCCAACTAGAAGATATGGCAGATACAGTGAACTATTGGGATCTGGTGCTGTGAAAAAGGTGTACAGGGCATTTGATCAAGAAGAGGGAATTGAGGTGGCTTGGAACCAAGTGAAACTGAGGAACTTCAGTGATGACCCTGCCATGGTGGATAGGCTTTATTCTGAAGTGAGGTTGCTCAGAAGCTTGACCAACAAAAACATCATTTCCCTTTACAGTGTTTGGAGGGATGAGAAGCACAACACTTTGAACTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGGAGTACAGGAAGAAGCACAGGCATGTGTCCATGAAGGCCTTGAAAAAATGGTCCAAGCAGATTTTGGAAGGGTTGAACTATTTGCATGTGCATGACCCGTGTATCATCCACAGAGACCTCAACTGCAGCAATGTGTTTGTGAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGGAAGAGCCACTCTGCACATTCAATTCTTGGGACACCAGAATTTATGGCACCTGAGTTATATGATGAGAACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTGTTAGAGATGGTGACACTAGAGATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATACAAGAAAGTGTCATCAGGTGTGAGGCCTCAGGCCTTGAACAAGATCAAAGATGCTGAGGTGAAGGCCTTCATTGAGAGGTGCCTTGCTCAACCAAGGGCTAGGCCTTCTGCTGCTGAGTTGCTCAAGGACCCCTTCTTTGATGTGCTTGATTACGACGAAAATGATTACTCTTATGCTTCATAA 900 0.4444 MTPSVKPDAFDKDSEPFVEIDPTRRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIISLYSVWRDEKHNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSILGTPEFMAPELYDENYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQALNKIKDAEVKAFIERCLAQPRARPSAAELLKDPFFDVLDYDENDYSYAS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00832 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 286 - -
Pumo1g00832 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Pumo1g00832 299 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Pumo1g00832 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00832 299 PIRSF TyrPK_CSF1-R 120 282 - -
Pumo1g00832 299 PIRSF TyrPK_CSF1-R 24 132 - -
Pumo1g00832 299 CDD STKc_WNK 25 285 - -
Pumo1g00832 299 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Pumo1g00832 299 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Pumo1g00832 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00832 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00832 Pumo-Chr1 12624807 12627238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00832 11 286 MAP Kinase Kinase Kinase AT5G55560 85.145 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo1g00832 Pkinase 5.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00832 K08867 - gmx:100782039 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00832 1 12624807 12627238 Pumo1g00832 1 12624807 12627238 ECH
Pumo1g00832 1 12624807 12627238 Pumo9g01818 9 47306206 47308592 PCT