Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00784 ATGGCTGAAACTGCAGTGACCCTTCTTGTTGATCATTTGCTGAAGTTACTGCATGATGAAGCAAAAATCTTAGTAGAGGTGCACGACGAGGTTAAGGGCATCATCAGTCAGCTAAACCTAATCAATCGTTTCATAAAAGATGCAGAGGGGAAGCAGGGAAACGTGAAAGTCAAAGATTGGGTTAATGAGTTGAGGAAAGTGGCATTTGGCATGGAGGATGTGGTTGATCACTATTTGCTCAAAGTGGCACAGCGTGGTCAAAGGCATGGGGTAGTCAACGAAAAGCTAAAGAGTGTAAAACCTCACCATGAAATTGCATCCAATATTGAAGATATAAGAACAAAAATAGACAACCTCTACAAAACAATAGAAGTCTTGAGACTGATCGAATCATCTGCAGGAGAGAGTGCTCCAAACAACTCTGCAACTCCAAGCCGCTCTCGTCTCGTGTTGAGGTATGTGTGTTCTCCAATATCCTTAGTTGCGGATGACCTTCAAAGGTTAGGGGTTCATTTTGTCGAGGAATCTCAACTTGTTGGTATTGAACAAAACAAGCGAGAGCTCACACATTGGCTAACAGAAAGGCAGTGTCCAGTGATGGTGGTGGTTGGCCCCGGAGGGATAGGTAAAACGACAATTGTGAAGAATGTGTATAACAAGCAGGTGAGCCAGCTGAAGAAGATAAACAAGGAGGGAACAAACTATTTTGAGTTTTGTGCATGGATAACCATGCCTCGGCCTCAAGTTGATGATCATTATAATCTGATAAGGCAAATTAAACAAAAAATAGTTGAGGAGGACCGCGGTGCATCAGCTGCATTGGGGAGTGAAACAACAAATCCAGAGGATCTTATAACAAAAGTAGGGAAATACTTCACAGATAAGAGGTGCCTCATTGTGTTTGATGATGTGAGGGAATCAAAATTTTGGAATGTTATCCAACATGCCATACCTCCACATAGCAGCAAAAGCAGTACTAAGGTTATTATCACTACAAGAGATGCAAGTGTTCCAGACCATATTCGAAGTGATACATCTGTTAAAGAATATACTCTAGAACCCTTGTCTTTAGAAGATGGTTTGAAGCTCTTTCGCCAGAAGTCATTTCAATTTGAGCAAGTGCAATTCCCTCAAGTGGACGATTTGTCTAAAAAGTTTGTGAAGAAATGCAACGGGGTGCCACTGGCTATTGTGGTTATTGCTGGTCTCCTTTCAACTATGAAAACCGCCATTGAATGGGAAAGGGTACTCGATCAACTTCACTCACTATTACAAAGTAACCCTCGTCTTGAACCTGTCCAACGAGCAATGATAGAAAGTTACCAAGATCTTCCTTCCCACCTCAAGCAGTGCTTCTTATACTTTGGCCTTTTCCCCGAGGGCTACTCCATTAGTTGCATGAGACTCATTCGTTTGTGGGTAGCCGAGGGTTTTGTAAAAGAAGGAGACGCTAACAACACATCAATGGAGGAATTTGCACAAGAGTACTTAGCTGAACTTGTCCGTAGATGCTTGGTTCATGTTTCAAGGGTGGATTTTGATGGAAGACCCAAAAGTTGTCATGTGTATAACCTCATGCATGAGTTGATTGCCAGGATTTGCGAGGAGCATATGTTTTGTCATGTCATGAAAGATACAATCACGCCACGTAACTCCAAGTTGGATTCCGCCCCTAGACGCATATCAATAATAAAGAAGAATGATAATGCTACTATGGAAAGAAACGAAAAATGGGAAAATGTGAGGTCTTGTTTTGTTTTCGATGATGGTAAGAAGTGGCTAGTGAAGAAATGTTTTTTCTCCAGTTTTGAGCATTTGGTTCGATTAGACTTGTCTAATGCGCTCCTTGATAATCTTCCTGAACAAGTTGGAAAACTATTGAACTTGAAATACTTGAGCCTGAGGAACACCAACATCATGTCACTTCCAAAGTCCATTGGCAACCTAGAGAAACTGCAGACTCTAGACCTAAAGCAAACTCAAGTGCATGAAGTGGAGATTAAGAAGCTAGTCAAGTTGCGTCATCTCCTTGCTTATTATATCAATAATCAGTATTCTGATTTGGACCGTCTACAAGGAGTGAAGTTAAGTGAAGGGCTCCAAAATCTAGAATCATTGCAGAAACTATCATTTTTGGATGCCAGTGATGGTAACATAATAGAGGAATTGAAACAACTGAAGAAGTTAAGGAAGCTGGGCATTATAAAGCTAAAAGAACAAAATGGTGAAGCACTATGCAAGGCTATAGAGAACAATGCCCATTTATGTTCCCTAAGTATTGGTGCTATGGGAAATCATGGCATGCTTAAGTTGCAATCTTTAAGGAACCCTCCATCGTCCCTTCAACGCCTTTACCTGTATGGGCGTTTAGAAAGTCTTCCAAATTGGATATCAAAACTTCCAAAACTTATCAGATTATACTTGAAGTGGTCTAATCTAAAGGAAGATCCATTACCTTACCTTAAAGATTTGCCAGAATTGTTGTACCTTGAGTTCTATGATACTTATGGTGGCGATGAGTTGCATTTCAAGAATGGATGGTTGAAACTGAAGGTTTTGTACTTGGGATCGTTGCCAAAGTTGAAGAACATAAAGATTGATAAAACAGCAATTCCTTGTCTTGAAGTGCTGAAGTTAGGGAAATGCCATGAAATGGTAAAGGTTCCCAGAGATATACAGAACTTGACAAGTCTTCAAAAGCTTTATCTCTATGGTGGGAATGATGACTTGATCTTTCAATCTAGAAAAAGAATGTTGAAGACCATAAAGATTGATGAAGGAGCAATTCCTTGTCTTGCAGAGTTGAAGATAGGGAAATGTCATGAAATGGTGCAGGTGCCCAGTGATATGAAGAACTTGGAAGGACTTAAAAAGCTTTATCTCTATGATATGCATCAACAATTTGTAAAGAGAATGACTGATACACGAAGTGAAGACTACAGTATTATTATTATTAACAGTATACTTCTCGTGGATTACTCCAATGAAGACCATTTTGCCACTCTTCATAATCCTGATTCTTGA 3024 0.4008 MAETAVTLLVDHLLKLLHDEAKILVEVHDEVKGIISQLNLINRFIKDAEGKQGNVKVKDWVNELRKVAFGMEDVVDHYLLKVAQRGQRHGVVNEKLKSVKPHHEIASNIEDIRTKIDNLYKTIEVLRLIESSAGESAPNNSATPSRSRLVLRYVCSPISLVADDLQRLGVHFVEESQLVGIEQNKRELTHWLTERQCPVMVVVGPGGIGKTTIVKNVYNKQVSQLKKINKEGTNYFEFCAWITMPRPQVDDHYNLIRQIKQKIVEEDRGASAALGSETTNPEDLITKVGKYFTDKRCLIVFDDVRESKFWNVIQHAIPPHSSKSSTKVIITTRDASVPDHIRSDTSVKEYTLEPLSLEDGLKLFRQKSFQFEQVQFPQVDDLSKKFVKKCNGVPLAIVVIAGLLSTMKTAIEWERVLDQLHSLLQSNPRLEPVQRAMIESYQDLPSHLKQCFLYFGLFPEGYSISCMRLIRLWVAEGFVKEGDANNTSMEEFAQEYLAELVRRCLVHVSRVDFDGRPKSCHVYNLMHELIARICEEHMFCHVMKDTITPRNSKLDSAPRRISIIKKNDNATMERNEKWENVRSCFVFDDGKKWLVKKCFFSSFEHLVRLDLSNALLDNLPEQVGKLLNLKYLSLRNTNIMSLPKSIGNLEKLQTLDLKQTQVHEVEIKKLVKLRHLLAYYINNQYSDLDRLQGVKLSEGLQNLESLQKLSFLDASDGNIIEELKQLKKLRKLGIIKLKEQNGEALCKAIENNAHLCSLSIGAMGNHGMLKLQSLRNPPSSLQRLYLYGRLESLPNWISKLPKLIRLYLKWSNLKEDPLPYLKDLPELLYLEFYDTYGGDELHFKNGWLKLKVLYLGSLPKLKNIKIDKTAIPCLEVLKLGKCHEMVKVPRDIQNLTSLQKLYLYGGNDDLIFQSRKRMLKTIKIDEGAIPCLAELKIGKCHEMVQVPSDMKNLEGLKKLYLYDMHQQFVKRMTDTRSEDYSIIIINSILLVDYSNEDHFATLHNPDS 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00784 1007 CDD RX-CC_like 19 119 IPR038005 -
Pumo1g00784 1007 PRINTS Disease resistance protein signature 199 214 - -
Pumo1g00784 1007 PRINTS Disease resistance protein signature 647 663 - -
Pumo1g00784 1007 PRINTS Disease resistance protein signature 291 305 - -
Pumo1g00784 1007 PRINTS Disease resistance protein signature 390 404 - -
Pumo1g00784 1007 Pfam NB-ARC domain 182 441 IPR002182 GO:0043531
Pumo1g00784 1007 Gene3D - 162 348 IPR027417 -
Pumo1g00784 1007 Gene3D - 4 106 - -
Pumo1g00784 1007 FunFam Probable disease resistance protein At1g63360 441 532 - -
Pumo1g00784 1007 PANTHER DISEASE RESISTANCE PROTEIN RP 31 866 IPR044974 GO:0006952
Pumo1g00784 1007 Gene3D - 355 439 IPR042197 -
Pumo1g00784 1007 Pfam Rx N-terminal domain 5 87 IPR041118 -
Pumo1g00784 1007 Gene3D Ribonuclease Inhibitor 563 979 IPR032675 -
Pumo1g00784 1007 SUPERFAMILY L domain-like 556 905 - -
Pumo1g00784 1007 Gene3D - 440 533 IPR036388 -
Pumo1g00784 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 455 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00784 Pumo-Chr1 11668624 11685557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00784 606 903 Receptor kinase-like Gene Family AT3G47580 27.157 1.20e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00784 K13457 - gmx:100782327 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00784 1 11668624 11685557 Pumo1g00784 1 11668624 11685557 ECH