Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00772 ATGTACTTACCAACTATCATCATCTTCATACTCTTCCTTCTCCACCCAACCACAACAACAGCAACAAGCCTCTCTTCTCATAATCAGAACACAACCACCTTGTTGTTCAGCTTCTCCTCCTTCACCCTCCGCAACATCACCCTCCTCGGCGATTCTTTCCTCCGCAACGGCCTCGTCGGCCTCACCCGCTCCACCCCCGTCCCCGCCTCCTCCTCCGGCACCCTCCTCTACAACCACCCCTTCACCACCACCCCCTCCCCCTCCTCTCTCTCCACCACCTTCACTTTCTCCATCACCAACACCACCACCACCACCACCTCTTCCTCCACCTTCACCTTCTTCCTCAACTCCTCCCACACCCTCTCCCTCATCTTCCACCCCAATCAAAACCAACTCTCCCTAGACTTAACCACCCCAAACTCCACCCAACCCAACCCAACAACATCCATTGATCTCAACACCCAGAATCCAATCACTTCTTGGCTTGACTACCATGCTGACAACAAAAAACTCAACGTTTTCTTAAACTACTCAACAGCTTCTTCTTCTTCTTCCAAGCCTCAAAATCCAATCTTGAGCGTTGACCTTGACCTTTCTGACTACTTTAATGACAATCTCTACGTGGGGTTTTCGGGTTCAACGCTAGGAAGCACCGAGCTTATTCAAGTCATGAGTTGGAGCTTCGAGTTTGAGTCGTTTCAGAAACCGAGTTCAAACTTGCACCCCCACAATGGTTCTAGAAGCCCCGGTGTTGCGGTTGAGGATATTCCTTCTTCTTCAAACTCCACCGAGGGTAATAATAACCGTGGCAAGAGATTTTTATTTGGTGTTGCTGTTGCCATTGCTGGTCCTGCTTTTTTCTGCGTGGTGCTTGTGGTTTTGGGGTATGTTTCTTTCCTCAAGTGGCGTGGTGTGAGGAAGCAGAAAAGTTTTGGGACAGTGGGGTATTGTCCAAAGGAGTTTGGTTACAAGGAATTGAAGTTAGCCACTAAGGGGTTTCATGCTTCAAGGGTAATTGGGAAAGGGTCGTTTGGGACAGTGTACAAGGCCTTGTTTGATTCTTCTGGGACCATAACCATTGCTGCGGTTAAGAGGTCAAGACAGTATTCTCATGAAGGAAGAACTGAGTTTCTGGCTGAGCTTTCTGTTATAGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTCTTAGGTTCGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTTTATGCCAAATGGGAGCTTGGACAAGGTGCTTTACCAAGAATGTGAAGGTGGGAATAGCAATTTGGTGAGTTGGGTTCATAGGGTTAACATTGCTGTTGGGTTGGCTTCTGTGTTGAGTTATTTGCACCAAGAGTGTGAGCAAAGGGTGATTCATAGGGACATCAAGACTGGGAACATATTGCTAGATGGGAGCATGAACCCAAGGTTGGGTGATTTTGGGTTGGCTAAGCTTATGGACCATGACAAGAGTCCTGTTTCAACACTAACTGCAGGGACAATGGGGTACCTTGCTCCTGAGTATCTTCAGTGTGGAATGGCAAATGAGAAGACTGATGTGTTCAGCTATGGTGTGGTTGTTCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAGAGGGAGGGGCAGAAGATGGTGAATTTGGTGGATTGGGTTTGGGGGTTGCACTCTCAAGGGAGGATCATTGAGGCTGCTGATAAGAGGTTGAATGGGGAGTTCAAGGAAGGGGAAATGAAGAGGCTTTTGCTTTTGGGGCTGAGTTGTGCTAACCCTGATAGTGCACAAAGACCTTCCATGAGAAGAGTGTTGCAGATTCTTAACAATCAAGGAGTGGCTCTTGTGGTGCCTAAAGAGAAACCAACACTTACTTTCTCTTCTGGCCTGCCTCTGAGTCTTGATGAGATTGTTTCTGATGCTGAGGAAGAGTTGAATTGTGGCCAGGTTGTGTGTGAGATCAAAATTGATTGA 1974 0.4777 MYLPTIIIFILFLLHPTTTTATSLSSHNQNTTTLLFSFSSFTLRNITLLGDSFLRNGLVGLTRSTPVPASSSGTLLYNHPFTTTPSPSSLSTTFTFSITNTTTTTTSSSTFTFFLNSSHTLSLIFHPNQNQLSLDLTTPNSTQPNPTTSIDLNTQNPITSWLDYHADNKKLNVFLNYSTASSSSSKPQNPILSVDLDLSDYFNDNLYVGFSGSTLGSTELIQVMSWSFEFESFQKPSSNLHPHNGSRSPGVAVEDIPSSSNSTEGNNNRGKRFLFGVAVAIAGPAFFCVVLVVLGYVSFLKWRGVRKQKSFGTVGYCPKEFGYKELKLATKGFHASRVIGKGSFGTVYKALFDSSGTITIAAVKRSRQYSHEGRTEFLAELSVIAGLRHKNLVQLLGSCVEKGELLLVYEFMPNGSLDKVLYQECEGGNSNLVSWVHRVNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGMANEKTDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSQGRIIEAADKRLNGEFKEGEMKRLLLLGLSCANPDSAQRPSMRRVLQILNNQGVALVVPKEKPTLTFSSGLPLSLDEIVSDAEEELNCGQVVCEIKID 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00772 657 Gene3D - 32 123 - -
Pumo1g00772 657 ProSiteProfiles Protein kinase domain profile. 333 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00772 657 ProSitePatterns Protein kinases ATP-binding region signature. 339 364 IPR017441 GO:0005524
Pumo1g00772 657 Pfam Legume lectin domain 127 238 IPR001220 GO:0030246
Pumo1g00772 657 Pfam Legume lectin domain 35 119 IPR001220 GO:0030246
Pumo1g00772 657 SUPERFAMILY Protein kinase-like (PK-like) 312 608 IPR011009 -
Pumo1g00772 657 Gene3D Phosphorylase Kinase; domain 1 318 411 - -
Pumo1g00772 657 FunFam L-type lectin-domain containing receptor kinase VIII.1 412 626 - -
Pumo1g00772 657 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Pumo1g00772 657 Gene3D - 124 279 - -
Pumo1g00772 657 MobiDBLite consensus disorder prediction 239 266 - -
Pumo1g00772 657 SMART serkin_6 333 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00772 657 Pfam Protein kinase domain 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00772 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pumo1g00772 657 PANTHER - 45 610 - -
Pumo1g00772 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 230 IPR013320 -
Pumo1g00772 657 CDD STKc_IRAK 339 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00772 Pumo-Chr1 11467932 11470119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00772 6 643 Receptor kinase-like Gene Family AT5G55830 53.372 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo1g00772 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00772 - - gmx:100808744 1034.25