Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00752 ATGGAAATTGGGAGAGAGGATGAGATTGTGGACATGTCAATGTCACCCCCATTAGTTGGTTCTACTAACAATGACTTTTGTCACAACAAAGAAGAGTTCATATCTCAGGCATGTCTTCAGAATAAGTACTCAGAGATTGACATAGAAATTGAAAGTTCCAATTTGGAACAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGCCAAGCAGGCTCTAGTAACCTTGTGAAAACAATGGTGTCAAAGGTATCCACACAACTCACTGTGGAAGAAGATAGATATAAGAAAATTTTGAAGGGAATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGGAAGACAACTCTGTTGAGAGTTATAGGAGGAAGACTAGTTGACAATGTAAAGGGAAAAGTAACTTACAATGATGTTCTTTTTACTCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACTGTTGAAGAAACTTTAGTCTTCTCTGCACTCTTGAGGCTACCAACCAATATGAGCAAGCAGCAAAAGTATGCAAAAGTGGATTCCACTATCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGCTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTATGAAACTCTTGTTGATCCTTCACTGTTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACTATAATTACAACAATACATCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTAATATCAGAAGGTTATCCTGTTTACTATGGAAAGGCTAAGGACACAATGGAGTACTTTTCATCCTTGAGATTCACCCCACAAATACCAATGAATCCTGCAGAGTTTTTGCTTGACTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACAGATATCTTTCAAGATCAAGAATCTTCTGACCCTTCAAAAGTTGTTATTGAATATCTACAACTCAAATACAAAACTCTATTGGAGCCAAAAGAAAAAGAAGAGAACCATAGAAGAGCAAACACACCAAAACATCTTCAACTAGCCATTCAGGTTAAGAAGGAATGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCCAGGAGAACATTCAGAGTAAGATGCAAGGACTATTTTGATAAGCTAAGGCTAGCTCAAGCACTTGGGATTGCACTTTTGTTGGGGCTCCTTTGGTGGAAATCTTCAACCAATACTGAAGCTCAACTCAGAGATCAGGTTGGTTTAGCTTTCTACATCTGTATATTCTGGACATCATCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGTACTACCTGATAAAAGAAAGGAAAGCTGACATGTATAGACTAAGTGTATACTATGCATGTAGCACTCTATGTGACATGGTGGCACATGTTTTCTATCCTACTTTTTTCATGGTCATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCATGACACTATTCACTATTCTGTTAATTGCCATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAATTATGAGTGTTCAAAGAGCAGGGACGGCTGCTTCTTTGATACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGAGATGGTTGAAGTATCTGTCCTTCATGTACTATGGTTTTAGGCTTCTTCTAAAAGTGCAATATTCAGGAAACCAGCTATATGATTGTGAAAGCAAAGGAGGGTGCAGGACCCTGCAGAGTTCACCTACATTTGGCACTGTAAACTTGAAAGGTGGATTAAAAGAAGTGTGGATTCTATTTGCCATGGCCTTAATCTTTCGGTTGTTAGCTTACTTGTGCCTCCGTAGAAGAATTGATAATTGCAACTAA 2052 0.3996 MEIGREDEIVDMSMSPPLVGSTNNDFCHNKEEFISQACLQNKYSEIDIEIESSNLEQNRPLPIFLKFEDVEYKVRNSQAGSSNLVKTMVSKVSTQLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKVTYNDVLFTPAVKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPTNMSKQQKYAKVDSTIKELGLERCRHTKIAGGYLKGISGGERKRTCIGYETLVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKDTMEYFSSLRFTPQIPMNPAEFLLDLATGQVNDISVPTDIFQDQESSDPSKVVIEYLQLKYKTLLEPKEKEENHRRANTPKHLQLAIQVKKEWTLSWLDQFVILSRRTFRVRCKDYFDKLRLAQALGIALLLGLLWWKSSTNTEAQLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMVILYFMAGFKRTVACFFMTLFTILLIAITSQGAGELFGAAIMSVQRAGTAASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGNQLYDCESKGGCRTLQSSPTFGTVNLKGGLKEVWILFAMALIFRLLAYLCLRRRIDNCN 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00752 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 52 672 - -
Pumo1g00752 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 329 IPR003439 GO:0005524
Pumo1g00752 683 Pfam ABC-2 type transporter 286 347 IPR043926 GO:0140359
Pumo1g00752 683 CDD ABCG_EPDR 82 311 - -
Pumo1g00752 683 Pfam ABC transporter 107 257 IPR003439 GO:0005524
Pumo1g00752 683 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Pumo1g00752 683 SMART AAA_5 116 307 IPR003593 GO:0016887
Pumo1g00752 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 322 IPR027417 -
Pumo1g00752 683 FunFam ABC transporter G family member 22 94 323 - -
Pumo1g00752 683 Gene3D - 89 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00752 Pumo-Chr1 11334162 11338481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00752 75 290 Calmodulin-binding Proteins AT2G36910 28.333 5.29e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00752 K05681 - gmx:100806094 1259.2